DRSC/TRiP Functional Genomics Resources

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Protein Alignment eloF and elovl4

DIOPT Version :9

Sequence 1:NP_649956.1 Gene:eloF / 41211 FlyBaseID:FBgn0037762 Length:257 Species:Drosophila melanogaster
Sequence 2:XP_002936253.1 Gene:elovl4 / 100496222 XenbaseID:XB-GENE-953769 Length:328 Species:Xenopus tropicalis


Alignment Length:258 Identity:93/258 - (36%)
Similarity:140/258 - (54%) Gaps:23/258 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KIPVVSNPWITMGTLIGYLLFVLKLGPKIMEHRKPFHLNGVIRIYNIFQILYNGLI---LVLGVH 70
            |.|::.:|..|:.....||| |:.||||.|::|:||.|..::..||...::.|..|   |.||. 
 Frog    29 KWPLMQSPLPTLAISTAYLL-VVWLGPKFMKNREPFQLRYLLIAYNFGMVILNFFIFKELFLGA- 91

  Fly    71 FLFVLKAYQISCIVSLPMDHKYKDRE-RLICTL--YLVNKFVDLVETIFFVLRKKDRQISFLHVF 132
                 ||...|.|.. |:|:...:.| |:...|  |.|:|.|:..:|:||:||||..|||||||:
 Frog    92 -----KAAGYSYICQ-PVDYSDDENEVRVASALWWYYVSKGVEYFDTVFFILRKKFNQISFLHVY 150

  Fly   133 HH---FAMAFFGYLYYCFHGYGGVAFPQCLLNTAVHVIMYAYYYLSSISKEVQRSLWWKKYITIA 194
            ||   |.:.:.|..:..    ||.:|....:|..:||:||.||.|::....:|:.||||:|:||.
 Frog   151 HHCTMFTLWWIGIKWVA----GGQSFFGAHMNALIHVVMYLYYGLAACGPHLQKYLWWKRYLTIL 211

  Fly   195 QLVQFAIILLHCTITLAQPNCAVNRPLTYGCGSLSAFFAVIFSQFYYHNYIKPGKKSAKQNKN 257
            |||||.:.:.|..::| ..:|...:.:.:.....:..|.::|..|||..|..| |..||..|:
 Frog   212 QLVQFHVTIGHTALSL-YIDCPFPKWMHWALIVYAITFIILFVNFYYRTYNAP-KAPAKSGKS 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eloFNP_649956.1 ELO 11..252 CDD:279492 89/249 (36%)
elovl4XP_002936253.1 ELO 31..268 CDD:366492 89/250 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 1 1.000 - - FOG0000078
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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