DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8534 and elo-9

DIOPT Version :9

Sequence 1:NP_649955.1 Gene:CG8534 / 41210 FlyBaseID:FBgn0037761 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_497086.1 Gene:elo-9 / 190207 WormBaseID:WBGene00001247 Length:286 Species:Caenorhabditis elegans


Alignment Length:296 Identity:75/296 - (25%)
Similarity:132/296 - (44%) Gaps:61/296 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NGTLIISEDPVRLP---LIGSPWPSLTI---------VSLYL----LFVLKLGRKFMENRKPYDL 54
            |.|:|.|  |....   ||.|.|..||:         .|:||    :....|.:::||:|||..:
 Worm    16 NETIIYS--PFEYDSTLLIESWWDDLTMHTFFKNHWFKSVYLSAAYIIATNLLQRYMESRKPKSM 78

  Fly    55 RRVIRAYNIMQIVYNGVILIAGLHFLFVLKAYDL---------RCITKLPLDHELKSRERWLTYS 110
            |.::.|:|....|::    |.|. :.|.::.||.         .|:...|     :|...:....
 Worm    79 RPLLLAWNGFLAVFS----IMGT-WRFGIEFYDAVFRRGFIDSICLAVNP-----RSPSAFWACM 133

  Fly   111 YFFNKFMDLLETVFFVLRKKDRQISFLHVFHH---LVMSFGGYLHITFNGYGGTLFPLCLLNVAV 172
            :..:|..:..:|:|.||||  |.:.|||.:||   |::|:...:.:|..|..     ...:|..|
 Worm   134 FALSKIAEFGDTMFLVLRK--RPVIFLHWYHHAVVLILSWHAAIELTAPGRW-----FIFMNYLV 191

  Fly   173 HVIMYAYYYLSSVS----KDVQTSRWKKYITIVQLVQFIL---VLANFSYTLMQPD-CNASRTVI 229
            |.|||.||.::|:.    |.|..:     :|.:|.:|.::   :.....|..:..: |..|...:
 Worm   192 HSIMYTYYAITSIGYRLPKIVSMT-----VTFLQTLQMLIGVSISCIVLYLKLNGEMCQQSYDNL 251

  Fly   230 YTGMFISTTFILMFANFYIHNYILNGSKQKSALKSD 265
            .....|..:|:::|::|:.:.|::...| |..:|.|
 Worm   252 ALSFGIYASFLVLFSSFFNNAYLVKKDK-KPDVKKD 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8534NP_649955.1 ELO 19..259 CDD:366492 67/275 (24%)
elo-9NP_497086.1 ELO 44..274 CDD:279492 59/251 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3071
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100813
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.720

Return to query results.
Submit another query.