DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8534 and elo-3

DIOPT Version :9

Sequence 1:NP_649955.1 Gene:CG8534 / 41210 FlyBaseID:FBgn0037761 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001367447.1 Gene:elo-3 / 183948 WormBaseID:WBGene00001241 Length:320 Species:Caenorhabditis elegans


Alignment Length:267 Identity:66/267 - (24%)
Similarity:112/267 - (41%) Gaps:56/267 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 WPSLTIVSLYLLFVLKLGRKFMENRKPYDLRRVIRAYNIMQIVYNGVILIAGL-----HFLFVLK 84
            |......|:..:.|:..|:|.||..||:.|...:..:|....:::    |.|.     .|::...
 Worm    38 WYQSITASVVYVAVIFTGKKIMEKYKPFQLDTPLFVWNSFLAIFS----ILGFLRMTPEFVWSWS 98

  Fly    85 A------YDLRC-------ITKLPLDHELKSRERWLTYSYFFNKFMDLLETVFFVLRKKDRQISF 136
            |      |.: |       :|..           | |..:..:|..:|::|:|.||||  |.:.|
 Worm    99 AEGNSFKYSI-CHSSYAQGVTGF-----------W-TEQFAMSKLFELIDTIFIVLRK--RPLIF 148

  Fly   137 LHVFHHL-VMSFGGYLHITFNGY-----GGTLFPLCLLNVAVHVIMYAYYYLSSVSKDVQTSRWK 195
            ||.:||: ||.:      |::.|     .|..|  ..:|..||.:||:||.|.|: |.....:..
 Worm   149 LHWYHHVTVMIY------TWHAYKDHTASGRWF--IWMNYGVHALMYSYYALRSL-KFRLPKQMA 204

  Fly   196 KYITIVQLVQFIL--VLANFSYTLMQPDCNASRTVIYTGMFIST--TFILMFANFYIHNYILNGS 256
            ..:|.:||.|.::  ::....|.:........:|....|:....  |:.|:||||:.|.|:...:
 Worm   205 MVVTTLQLAQMVMGVIIGVTVYRIKSSGEYCQQTWDNLGLCFGVYFTYFLLFANFFYHAYVKKNN 269

  Fly   257 KQKSALK 263
            :.....|
 Worm   270 RYTEVKK 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8534NP_649955.1 ELO 19..259 CDD:366492 65/261 (25%)
elo-3NP_001367447.1 ELO 33..270 CDD:395916 65/259 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1820
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100813
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.770

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