DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FBXO11 and AT1G52650

DIOPT Version :9

Sequence 1:NP_001262441.1 Gene:FBXO11 / 41209 FlyBaseID:FBgn0037760 Length:1182 Species:Drosophila melanogaster
Sequence 2:NP_175674.3 Gene:AT1G52650 / 841697 AraportID:AT1G52650 Length:465 Species:Arabidopsis thaliana


Alignment Length:484 Identity:92/484 - (19%)
Similarity:155/484 - (32%) Gaps:144/484 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   371 LPDEVLLAIFSYLMEQDLCRLALVCKRF--------NTIANDT---------ELWKRLYQSVFEY 418
            ||:.||..|||:|..::....:::|||:        |.:.:|:         |....:.||..|:
plant     7 LPEGVLCNIFSFLTTKEAALTSILCKRWRNLLAFVPNLVIDDSVFLHPEEGKEERYEIQQSFMEF 71

  Fly   419 -DLPLF---NPELCKF--VFEKPEESEYANPWKESFRQLYRGVH------VRPGYQ-----ERRS 466
             |..|.   |..:.||  .|.....|...|.|..:.  |.|||.      :..|.:     .:..
plant    72 VDRVLALQGNSPIKKFSLKFRTDFASHRVNAWISNV--LARGVSELDVLVILYGAEFLPLSPKCF 134

  Fly   467 SGRSIVFFNTIQAALDYPEERAAAGVFVP--------------------AGAGAGNVVSAGLSNT 511
            ..|::|........:|:    .|..:|:|                    |......:|...:|..
plant   135 KSRNLVTLKINSLGIDW----LAGDIFLPMLKTLVLHSVKLCVDKFFFRALPALEELVLFAVSWR 195

  Fly   512 SASAGVGGASVNALV---NIYEEQVAPTEHPGPLIFLHAGHYKGEYLFIDSDVALVGAAPGNVAE 573
            .....|..||:..|.   |.|...:: .:.|..:.|..:.|...:|.....: .|..|....:..
plant   196 DRDVTVSNASIKTLTIKFNYYLGTLS-LDTPSLVSFCFSDHVAKDYPLAKME-KLSEARISLLVT 258

  Fly   574 SVILEREAGSTVMFVEG---AKYAYVGYLT--------LKFSPEVTSTVS----------HHKHY 617
            ...:||.....:.:||.   .:...||.|.        |..||.....:|          :.|..
plant   259 EYQIERARAPNIYWVEDDVVLRLVNVGKLMKGIRNVQYLNLSPNTLEVLSKCCESMPLFNNLKSL 323

  Fly   618 CLDIGE------------NCSPTVDNCIIR------STSVVGAAVCVGGVNANPVIRNCDISDCE 664
            .::..|            || |.::..::.      :.....|..||........:.:|.:...|
plant   324 TIESNERRGWQAMPVLLRNC-PHLETLVLEGLLHHVTEKCRNACDCVSQEEKGRSLTSCQVKVLE 387

  Fly   665 NVGLYVTDYAQGTYEHNEISRNALAGIWVKNFASPIMRENHIHHGRDVGIFTFENG--------- 720
            ..|...|.....|.:|           ::::|  |.:||..||        ..|||         
plant   388 IKGFQGTTKEMHTIKH-----------FLEHF--PCLREIKIH--------MEENGPTQLRVPEV 431

  Fly   721 -------MGYFEKNDIHNNR--IAGFEVK 740
                   |.::||:...|.:  :.|:..|
plant   432 SQYIAEMMEHYEKSSSCNVQLLVGGYLCK 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FBXO11NP_001262441.1 F-box-like 370..414 CDD:289689 14/59 (24%)
Beta_helix 650..796 CDD:289971 21/109 (19%)
Beta_helix 735..882 CDD:289971 2/6 (33%)
Beta_helix 919..1077 CDD:289971
ZnF_UBR1 1093..>1146 CDD:197698
AT1G52650NP_175674.3 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1027299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.