DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FBXO11 and Fbxo11

DIOPT Version :10

Sequence 1:NP_649954.1 Gene:FBXO11 / 41209 FlyBaseID:FBgn0037760 Length:1182 Species:Drosophila melanogaster
Sequence 2:XP_038968054.1 Gene:Fbxo11 / 301674 RGDID:727935 Length:933 Species:Rattus norvegicus


Alignment Length:857 Identity:578/857 - (67%)
Similarity:667/857 - (77%) Gaps:72/857 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 GAGTAASGGAG---------------CAPTAAQYLQYELPDEVLLAIFSYLMEQDLCRLALVCKR 397
            ||.|:.:...|               .|..|.||||.:|||||:|.|||||:||||||.|.||||
  Rat   127 GASTSTTENFGHRAKRARVSGKSQDLSAAPAEQYLQEKLPDEVVLKIFSYLLEQDLCRAACVCKR 191

  Fly   398 FNTIANDTELWKRLYQSVFEYDLPLFNPELCKFVFEKPEESEYANPWKESFRQLYRGVHVRPGYQ 462
            |:.:|||..||||||..||||..|:.:||..||....|||.|:.|||||||:|||:|.||:||:.
  Rat   192 FSELANDPILWKRLYMEVFEYTRPMMHPEPGKFYQINPEEYEHPNPWKESFQQLYKGAHVKPGFA 256

  Fly   463 ER------RSSGR-SIVFFNTIQAALDYPEERAAAGVFVPAGAGAGNVVSAGLSNTSASAGVGGA 520
            |.      |..|| ::::::||:.||                   |.|..|              
  Rat   257 EHFYSNPARYKGRENMLYYDTIEDAL-------------------GGVQEA-------------- 288

  Fly   521 SVNALVNIYEEQVAPTEHPGPLIFLHAGHYKGEYLFIDSDVALVGAAPGNVAESVILEREAGSTV 585
                             |...|||:|:|.|..|:::|:|.:.::|||||.||:.||:|....||.
  Rat   289 -----------------HFDGLIFVHSGIYTDEWIYIESPITMIGAAPGKVADKVIIENTRDSTF 336

  Fly   586 MFVEGAKYAYVGYLTLKFSPEVTSTVSHHKHYCLDIGENCSPTVDNCIIRSTSVVGAAVCVGGVN 650
            :|:||::.|||||:|::|:|:..|...|:.|:||:|..||||.:|:||||||..||:||||.|..
  Rat   337 VFMEGSEDAYVGYMTIRFNPDDKSAQHHNAHHCLEITVNCSPIIDHCIIRSTCTVGSAVCVSGQG 401

  Fly   651 ANPVIRNCDISDCENVGLYVTDYAQGTYEHNEISRNALAGIWVKNFASPIMRENHIHHGRDVGIF 715
            |.|.|::|:||||||||||:||:|||.||.||||.||||||||||..:||:|.||||||||||:|
  Rat   402 ACPTIKHCNISDCENVGLYITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVGVF 466

  Fly   716 TFENGMGYFEKNDIHNNRIAGFEVKAGANPTVVKCEIHHGQTGGIYVHENGLGQFIENRIHSNNF 780
            ||::||||||..:||.||||||||||.||||||:|||||||||||||||.|.||||||:|::|||
  Rat   467 TFDHGMGYFESCNIHRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIENKIYANNF 531

  Fly   781 AGVWITSNSNPTIRKNEIYNGHQGGVYIFGEGRGLIEHNNIYGNALAGIQIRTNSDPIVRHNKIH 845
            |||||||||:||||.|.|:||:||||||||:||||||.|:|||||||||||||||.|||||||||
  Rat   532 AGVWITSNSDPTIRGNSIFNGNQGGVYIFGDGRGLIEGNDIYGNALAGIQIRTNSCPIVRHNKIH 596

  Fly   846 HGQHGGIYVHEKGQGLIEENEVYSNTLAGVWITTGSTPVLRRNRIHSGKQVGVYFYDNGHGKLED 910
            .||||||||||||||:|||||||||||||||:|||||||||||||||||||||||||||||.|||
  Rat   597 DGQHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIHSGKQVGVYFYDNGHGVLED 661

  Fly   911 NDIFNHLYSGVQIRTGSNPVIRGNKIWGGQNGGVLVYNGGLGLLEQNEIFDNAMAGVWIKTDSNP 975
            |||:||:||||||||||||.||.||||||||||:||||.|||.:|.|||||||||||||||||||
  Rat   662 NDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGCIEDNEIFDNAMAGVWIKTDSNP 726

  Fly   976 TLKRNKIYDGRDGGICIFNGGKGILEENDIFRNTQAGVLISTQSHPILRRNRIYDGQAAGVEITN 1040
            ||:||||:|||||||||||||:|:|||||||||.||||||||.|||:||:|||:||.|||:||||
  Rat   727 TLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGVLISTNSHPVLRKNRIFDGFAAGIEITN 791

  Fly  1041 NATATLEHNQIFKNKFGGLCLASGVQPITRGNNIFNNEDEVEKAVSSGQCLYKISSYTSFPMHDF 1105
            :||||||.||||.|:||||.|||||....:.|.|.||:|.:|||||.||||||||||||:|||||
  Rat   792 HATATLEGNQIFNNRFGGLFLASGVNVTMKDNKIMNNQDAIEKAVSRGQCLYKISSYTSYPMHDF 856

  Fly  1106 YRCQTCNTTDRNAICVNCIKNCHAGHDVEFIRHDRFFCDCGAGTLSNQCQLQGEPTQDTDTLYDS 1170
            |||.||||||||||||||||.||.|||||||||||||||||||||||.|.|.||||.||||||||
  Rat   857 YRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFCDCGAGTLSNPCTLAGEPTHDTDTLYDS 921

  Fly  1171 AAPMESHTLMVN 1182
            |.|:||:||..|
  Rat   922 APPIESNTLQHN 933

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FBXO11NP_649954.1 F-box_FBXO11 368..412 CDD:438863 31/43 (72%)
Beta_helix 650..798 CDD:463811 115/147 (78%)
Beta_helix 735..890 CDD:463811 135/154 (88%)
Beta_helix 919..1075 CDD:463811 125/155 (81%)
UBR-box_UBR6_FBXO11 1090..1158 CDD:439074 61/67 (91%)
Fbxo11XP_038968054.1 F-box_FBXO11 162..206 CDD:438863 31/43 (72%)
Beta_helix 337..503 CDD:463811 111/165 (67%)
Beta_helix 440..595 CDD:463811 126/154 (82%)
Beta_helix 532..687 CDD:463811 137/154 (89%)
Beta_helix 670..825 CDD:463811 125/154 (81%)
UBR-box_UBR6_FBXO11 841..909 CDD:439074 61/67 (91%)

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