DRSC/TRiP Functional Genomics Resources

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Protein Alignment FBXO11 and dre-1

DIOPT Version :9

Sequence 1:NP_001262441.1 Gene:FBXO11 / 41209 FlyBaseID:FBgn0037760 Length:1182 Species:Drosophila melanogaster
Sequence 2:NP_001368566.1 Gene:dre-1 / 179045 WormBaseID:WBGene00001089 Length:1022 Species:Caenorhabditis elegans


Alignment Length:1064 Identity:533/1064 - (50%)
Similarity:679/1064 - (63%) Gaps:122/1064 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 STASTSAAAAAAASASAGSSHQSPYDLR-------RKISASSHEQWPTSSSSAVAA---AAAILV 227
            |..||.||..:......|||....:.:|       |....|:.....|:|:|.|.|   ..:.||
 Worm    19 SLVSTRAAHLSPKLQRRGSSSARKFAIRNLPPSTQRVTRRSTRRGSSTASTSCVPAFEGPTSSLV 83

  Fly   228 GP--SSSSPPLVNP----------GASPSSSSSSSSSSS---SSSSASSSSSSSNVQAPSTSATF 277
            |.  ||||.|..:|          ..|||.|.:|:|.|.   .|...::..|:|...:||.|:  
 Worm    84 GQEMSSSSSPFFHPPPQQVMDDTTQQSPSYSQNSNSPSQHTFESMEPAAGGSTSMRYSPSGSS-- 146

  Fly   278 PVNNAPTTGATLAQPPNVHSSVPQQHC------GALPVGAAIEDNNYMLPARKRSRRLYTQGGE- 335
            ..:| ||.|...||....:|...::.|      ...|:.||..|.... |..|:.:......|| 
 Worm   147 EADN-PTLGLFSAQASYPYSLRKRRPCLTKDEDLCFPITAATADETPQ-PTMKKFKLECLSPGEA 209

  Fly   336 ----MGPSAGATGEAAGAGTAASGGAGCAPTAAQYLQYE--------LPDEVLLAIFSYLMEQDL 388
                :...:|...||....|.      |.|...:.::.|        ||:|:||.:||:|.::.|
 Worm   210 RDFSIEDESGTNLEAKMETTE------CEPEEEEAVEEEDQQDHINRLPEELLLKVFSFLPDKSL 268

  Fly   389 CRLALVCKRFNTIANDTELWKRLYQSVFEYDLPLFNPELCKFVFEKPEESEYANPWKESFRQLYR 453
            ...:.|..|||.|:|..|:||.||.::::|.:|||:|...||.|.:.......||||||.|||:.
 Worm   269 LACSSVSYRFNQISNSHEVWKELYCNLYDYRIPLFHPSHAKFEFREQSRWRDGNPWKESHRQLHH 333

  Fly   454 GVHVRPGYQERRSSGRSIVF--FNTIQAALDYPEERAAAGVFVPAGAGAGNVVSAGLSNTSASAG 516
            ||||   .:|.|.:.||:.:  |:.|:.|..:.||                              
 Worm   334 GVHV---MKEPRVNLRSVNYRCFDQIEKAQSFLEE------------------------------ 365

  Fly   517 VGGASVNALVNIYEEQVAPTEHPGPLIFLHAG-HYKGEYLFIDSDVALVGAAPG-NVAESVILER 579
                      :.|.|:         |||||.| |...:.:.|::||.::||:.. ::..||:||.
 Worm   366 ----------DEYREK---------LIFLHTGVHEPIDTILINTDVQIIGASDSRDITSSVVLEG 411

  Fly   580 EAGSTVMFVEGAKYAYVGYLTLKF--------SPEVTSTVSHHKHY--CLDIGENCSPTVDNCII 634
            ...:.:.|.:|:..||.|::|::|        .|::........|:  .|...::..|.::.|.|
 Worm   412 SKNTALTFTDGSANAYFGFITVRFRADPVCRQQPQIAQQAQQMNHFYSILVTDKDAMPYIERCDI 476

  Fly   635 RSTSVVGAAVCVGGVNANPVIRNCDISDCENVGLYVTDYAQGTYEHNEISRNALAGIWVKNFASP 699
            .|....|||||| ..:|.|..:.|.:.||||||:|:||.|.|.|||.||:||.|||:||||.|:|
 Worm   477 TSKVGNGAAVCV-KKSAAPKFKYCTVLDCENVGIYITDNATGHYEHCEIARNTLAGVWVKNHANP 540

  Fly   700 IMRENHIHHGRDVGIFTFENGMGYFEKNDIHNNRIAGFEVKAGANPTVVKCEIHHGQTGGIYVHE 764
            ..|:..||.|:|||:||||:|.|||||.:||:|||:|.|||..|||.|::||:|||.||||||||
 Worm   541 YFRKCTIHSGKDVGVFTFEHGQGYFEKCNIHSNRISGIEVKNSANPVVIRCEVHHGYTGGIYVHE 605

  Fly   765 NGLGQFIENRIHSNNFAGVWITSNSNPTIRKNEIYNGHQGGVYIFGEGRGLIEHNNIYGNALAGI 829
            .|.|||:||||::|.:||:||||:|:||||||||:.|.|||||||||||||||.|||||||||||
 Worm   606 RGRGQFMENRIYANAYAGIWITSHSDPTIRKNEIFTGQQGGVYIFGEGRGLIEQNNIYGNALAGI 670

  Fly   830 QIRTNSDPIVRHNKIHHGQHGGIYVHEKGQGLIEENEVYSNTLAGVWITTGSTPVLRRNRIHSGK 894
            |||:.||||||.||||.|.||||||||||:|||||||||.|||||:|:||||:|:||:|||||||
 Worm   671 QIRSQSDPIVRLNKIHDGLHGGIYVHEKGRGLIEENEVYGNTLAGIWVTTGSSPILRKNRIHSGK 735

  Fly   895 QVGVYFYDNGHGKLEDNDIFNHLYSGVQIRTGSNPVIRGNKIWGGQNGGVLVYNGGLGLLEQNEI 959
            ||||||||.|||.||:|||||||||||||||||||.|..|||||||||||||||||.|.||.|||
 Worm   736 QVGVYFYDQGHGLLEENDIFNHLYSGVQIRTGSNPKITRNKIWGGQNGGVLVYNGGKGCLEDNEI 800

  Fly   960 FDNAMAGVWIKTDSNPTLKRNKIYDGRDGGICIFNGGKGILEENDIFRNTQAGVLISTQSHPILR 1024
            ||||||||||||||.|||:|||||||||||:||||.|||:||:|:||||.||||||||:|:|.||
 Worm   801 FDNAMAGVWIKTDSEPTLRRNKIYDGRDGGVCIFNRGKGLLEDNEIFRNAQAGVLISTESNPTLR 865

  Fly  1025 RNRIYDGQAAGVEITNNATATLEHNQIFKNKFGGLCLASGVQPITRGNNIFNNEDEVEKAVSSGQ 1089
            |||::||::||:||||.||||||.||:|:||:||||:|:||.|:.|||.|::|.|.:.:|:.:|.
 Worm   866 RNRVFDGKSAGIEITNGATATLEENQLFRNKYGGLCVATGVTPVQRGNRIYDNHDTISRAIKTGL 930

  Fly  1090 CLYKISSYTSFPMHDFYRCQTCNTTDRNAICVNCIKNCHAGHDVEFIRHDRFFCDCGAGTLSNQC 1154
            ||:|:||..|||||:||||.|||||:|||||.|||:.||.||.||.:|.||||||||||||...|
 Worm   931 CLFKVSSNNSFPMHNFYRCTTCNTTERNAICTNCIRTCHRGHSVELVRFDRFFCDCGAGTLERHC 995

  Fly  1155 QLQGEPTQDTDTLYDSAAPMESHT 1178
            .||..| :|.||:||||.|:.:.|
 Worm   996 HLQNVP-RDNDTVYDSATPISTET 1018

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FBXO11NP_001262441.1 F-box-like 370..414 CDD:289689 21/51 (41%)
Beta_helix 650..796 CDD:289971 93/145 (64%)
Beta_helix 735..882 CDD:289971 114/146 (78%)
Beta_helix 919..1077 CDD:289971 123/157 (78%)
ZnF_UBR1 1093..>1146 CDD:197698 38/52 (73%)
dre-1NP_001368566.1 F-box-like 248..292 CDD:403981 18/43 (42%)
Beta_helix 484..637 CDD:404168 98/153 (64%)
Beta_helix 576..723 CDD:404168 114/146 (78%)
Beta_helix 760..918 CDD:404168 123/157 (78%)
zf-UBR 946..>987 CDD:418636 30/40 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159753
Domainoid 1 1.000 255 1.000 Domainoid score I1107
eggNOG 1 0.900 - - E1_KOG1777
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11843
Inparanoid 1 1.050 970 1.000 Inparanoid score I152
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49227
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005000
OrthoInspector 1 1.000 - - oto19005
orthoMCL 1 0.900 - - OOG6_104692
Panther 1 1.100 - - LDO PTHR22990
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4145
SonicParanoid 1 1.000 - - X4648
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.830

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