DRSC/TRiP Functional Genomics Resources

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Protein Alignment FBXO11 and LOC101731571

DIOPT Version :9

Sequence 1:NP_001262441.1 Gene:FBXO11 / 41209 FlyBaseID:FBgn0037760 Length:1182 Species:Drosophila melanogaster
Sequence 2:XP_012815591.1 Gene:LOC101731571 / 101731571 -ID:- Length:224 Species:Xenopus tropicalis


Alignment Length:138 Identity:33/138 - (23%)
Similarity:47/138 - (34%) Gaps:38/138 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   549 HYKGEYLFIDSDVALVGAAPGNVAESVILEREAGSTVMFVEGAKYAYVGYLTL------KFSPEV 607
            |.:.|:|.||    :|...||......|  ::.....:.....|...|.|..|      .|..|.
 Frog    45 HVRLEHLRID----VVSENPGQTQFHTI--KKQSWDALIKHSPKVNIVMYFFLYEEEFDAFFREE 103

  Fly   608 TSTVSH-------HKHYCLDIGENCSPTVDNCIIRSTSVVGAAVCVGGVNA--NPVIRNCDISDC 663
            | .|:|       .|.....||.||...::           ..||..|:..  :.:||..|  .|
 Frog   104 T-PVTHLYFGRAVSKAMLGRIGMNCPHLIE-----------LVVCTNGLQPLDDELIRIAD--RC 154

  Fly   664 EN---VGL 668
            :|   :||
 Frog   155 KNLTSIGL 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FBXO11NP_001262441.1 F-box-like 370..414 CDD:289689
Beta_helix 650..796 CDD:289971 7/24 (29%)
Beta_helix 735..882 CDD:289971
Beta_helix 919..1077 CDD:289971
ZnF_UBR1 1093..>1146 CDD:197698
LOC101731571XP_012815591.1 leucine-rich repeat 22..47 CDD:275381 1/1 (100%)
leucine-rich repeat 48..82 CDD:275381 8/39 (21%)
AMN1 <114..>188 CDD:187754 15/62 (24%)
leucine-rich repeat 130..156 CDD:275381 7/38 (18%)
leucine-rich repeat 157..182 CDD:275381 2/6 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1027299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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