DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9467 and Shkbp1

DIOPT Version :10

Sequence 1:NP_001369000.1 Gene:CG9467 / 41207 FlyBaseID:FBgn0037758 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_001258009.1 Gene:Shkbp1 / 292735 RGDID:1309281 Length:704 Species:Rattus norvegicus


Alignment Length:685 Identity:344/685 - (50%)
Similarity:460/685 - (67%) Gaps:73/685 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 THASSSDLVNLNVGGQRFSTSRQTLTWIPDTFFTALLSGRISSLRDEHNAIFIDRDPTLFSIILN 69
            :..:..::::|||||:||||||||||||||:||::|||||||:|:||..|||||||||:|:.|||
  Rat    13 SRGAPGEVIHLNVGGKRFSTSRQTLTWIPDSFFSSLLSGRISTLKDETGAIFIDRDPTVFAPILN 77

  Fly    70 YLRTKDIDIKNCEIRALRHEAEYYGITPLTKRLALCEDLNHSSCGDLLFYGFLAAPPMPSNEAVA 134
            :||||::|.:.....:|.|||::||:|||.:||.:.|:|:.||||::||.|:|..|..|......
  Rat    78 FLRTKELDPRGVHGSSLLHEAQFYGLTPLVRRLQVREELDRSSCGNVLFNGYLPPPVFPVKRRNR 142

  Fly   135 ATSVDESLPSTSASAIGSRPGSMVRVPEPSRSSHSRNSSWDLRLGRTGSTGNGANPPAPMLHSRN 199
            .:.|       ....||.||.       |.|    |:::....||..|..|.       ||..|.
  Rat   143 HSLV-------GPQQIGGRPA-------PVR----RSNTMPPNLGNAGLLGR-------MLDDRA 182

  Fly   200 PSIDFMRHSRNSSADLNKVFRNEVGLVFSPTQNSNWVDPLRVQIIKAHQNWIAVAYAHFVTCYRV 264
            |                            |:.:....:|..|:::..|.|||||||.||:.|||:
  Rat   183 P----------------------------PSPSGQPEEPGMVRLVCGHHNWIAVAYTHFLVCYRL 219

  Fly   265 KDSNGWQQVFTSPHIDATIERIAINSKVNTSAAEPLPSKMVAISYGSQIRLWSIQEGGQKTDVGT 329
            |:::|||..|:||.:|..|||:|:.::| ...|.....||||.:.||:|.||::|..|..:::|.
  Rat   220 KEASGWQLAFSSPRLDWPIERLALTARV-LGGAPGEHDKMVAAATGSEILLWALQAQGGGSEIGV 283

  Fly   330 FNLNVRVEYLFFIGSQLVALSSSGKIGVWHAMTQHWQIQDLVPVLSFDSAGSFLLLGCNNGSIYY 394
            |:|.|.||.|||:|:||:|.|.:|:||||:|:|:|||:|::.|:.|:|:|||||||||:||||||
  Rat   284 FHLGVPVEALFFVGNQLIATSHTGRIGVWNAVTKHWQVQEVQPITSYDAAGSFLLLGCSNGSIYY 348

  Fly   395 IDMQKFPLRIKDNDLLVTELYKDVTLDPITAISVYLTPKTSSISGNWIEIAYGTKSGAVRIIVQH 459
            :|:||||||:|||||||:|||:|...|.:||:|||||||||. |||||||||||.||.||:||||
  Rat   349 VDVQKFPLRMKDNDLLVSELYRDPAEDGVTALSVYLTPKTSD-SGNWIEIAYGTSSGVVRVIVQH 412

  Fly   460 PETAGHGPHLFETFFVHQSPVTKVMLSEKYLVSVCSEYHHVRTWRLTRFRGMLSTQPGSTPEASF 524
            |||.|.||.||:||.||:|||||:|||||:|:|||::.:|||||.:||||||:||||||||.|||
  Rat   413 PETVGSGPQLFQTFSVHRSPVTKIMLSEKHLISVCADNNHVRTWSVTRFRGMISTQPGSTPLASF 477

  Fly   525 KIVSLEATDTSYSYAAGNDFGPYGDYDD-MIFVQKVVPETDQLYVRLASNGDRVCVIRSVDSSTI 588
            ||::||:.|.....:||||.||||:.|| .:|:|||||...||:|||:|.|.|||.:||||.|..
  Rat   478 KILALESADGLGGCSAGNDIGPYGERDDQQVFIQKVVPNASQLFVRLSSTGQRVCSVRSVDGSAT 542

  Fly   589 SAFCVLECEVS-------SRFILTGHCNGAIQMWDLTTALALLSKDEPQQKINGGPDTNELLRLL 646
            :||.|||||.|       .|::|||..||::.|||||||:     |...|...||....||:..|
  Rat   543 TAFTVLECEGSRRLGSRPRRYLLTGQANGSLAMWDLTTAM-----DGLGQTPAGGLTEEELMDQL 602

  Fly   647 DQCEIS---NSSCTTPCMSP--CLSAMGNGSGMAS 676
            :|||:|   :|..:.|..||  .|:::.:.|...|
  Rat   603 EQCELSPLTSSRASFPSPSPRTSLTSLHSASSNTS 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9467NP_001369000.1 BTB_POZ_KCTD3-like 10..95 CDD:349672 54/84 (64%)
Shkbp1NP_001258009.1 BTB_POZ_SHKBP1 18..120 CDD:349701 62/101 (61%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 146..165 8/36 (22%)
WD 1 233..280 18/47 (38%)
WD 2 283..322 23/38 (61%)
WD 3 324..359 25/34 (74%)
WD 4 428..466 27/37 (73%)
WD 5 548..586 19/42 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 609..704 7/29 (24%)
PXXXPR. /evidence=ECO:0000305 618..623 2/4 (50%)
PXXXPR. /evidence=ECO:0000305 678..683
Blue background indicates that the domain is not in the aligned region.

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