DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8500 and rit1

DIOPT Version :10

Sequence 1:NP_649948.1 Gene:CG8500 / 41203 FlyBaseID:FBgn0037754 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_001122253.1 Gene:rit1 / 793942 ZFINID:ZDB-GENE-070912-329 Length:211 Species:Danio rerio


Alignment Length:191 Identity:64/191 - (33%)
Similarity:105/191 - (54%) Gaps:3/191 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TRAAPEQSNDYRVVVFGAGGVGKSSLVLRFIKGTFRESYIPTIEDTYRQVISCNKNICTLQITDT 73
            :|:....|.:|::|:.|.||||||:::::||...|.|.:.|||||.|:..|..:.....|.|.||
Zfish     4 SRSTVGHSREYKLVMLGEGGVGKSAIIMQFISHRFPEDHDPTIEDAYKTQIRIDDEPANLDILDT 68

  Fly    74 TGSHQFPAMQRLSISKGHAFILVYSVCSKQSLEELRPIWALIKELKGADIPNIPVMLVGNKCDET 138
            .|..:|.||:...:..|..||:.||:..::|.:|.|....||..::..  .:.||:|||||.| .
Zfish    69 AGQAEFTAMRDQYMRAGEGFIISYSITDRRSFQEARHFKQLIYRVRRT--VDTPVVLVGNKSD-L 130

  Fly   139 AELREVSQAEGQAQATTWSISFMETSAKTNHNVTELFQELLNMEKTRTVSLQLDTKKQKKQ 199
            ..||:||..||:..|..:...|.||||...:.:.|:|..|:...:.....:..|::::.::
Zfish   131 VHLRQVSVEEGKQLAREFQCPFFETSAAFRYYIDEVFAALVRQIRQHEAEMVRDSERKTRR 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8500NP_649948.1 ARHI_like 18..183 CDD:206711 61/164 (37%)
rit1NP_001122253.1 P-loop containing Nucleoside Triphosphate Hydrolases 12..180 CDD:476819 61/170 (36%)

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