DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8500 and Rasd1

DIOPT Version :10

Sequence 1:NP_649948.1 Gene:CG8500 / 41203 FlyBaseID:FBgn0037754 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_001257883.1 Gene:Rasd1 / 64455 RGDID:619727 Length:280 Species:Rattus norvegicus


Alignment Length:273 Identity:84/273 - (30%)
Similarity:132/273 - (48%) Gaps:52/273 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VTRAAPEQS-------NDYRVVVFGAGGVGKSSLVLRFIKGTFRESYIPTIEDTYRQVISCNKNI 65
            :.:..|..|       |.||:|:.|:..|||:::|.||:.|.|.::|.|||||.:|:..|....:
  Rat     7 IKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIEDFHRKFYSIRGEV 71

  Fly    66 CTLQITDTTGSHQFPAMQRLSISKGHAFILVYSVCSKQSLEELRPIWALIKELKGA------DIP 124
            ..|.|.||:|:|.||||:||||..|..||||:|:.::.|.||::.:...|.:.|..      :..
  Rat    72 YQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLKQQILDTKSCLKNKTKENV 136

  Fly   125 NIPVMLVGNKCD----ETAELREVSQAEGQAQATTWSISFMETSAKTNHNVTELFQELLNMEKT- 184
            ::|:::.|||.|    ...|.||:.|..|.   .....::.|.|||.|.::.::|:.|..|.|. 
  Rat   137 DVPLVICGNKGDRDFYREVEQREIEQLVGD---DPQRCAYFEISAKKNSSLDQMFRALFAMAKLP 198

  Fly   185 --------RTVSLQ-LDTKKQKKQKKEKKSKDTNGSIPENGDA---------------------- 218
                    |.||:| .|...:|..:.:|..:..:|...::|||                      
  Rat   199 SEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGSGGGGDHGDAFGILAPFARRPSVHSDLMYIRE 263

  Fly   219 GASASGGAKEKCR 231
            ..|.|..||:|.|
  Rat   264 KTSVSSQAKDKER 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8500NP_649948.1 ARHI_like 18..183 CDD:206711 63/174 (36%)
Rasd1NP_001257883.1 Rhes_like 25..280 CDD:133343 81/255 (32%)
Effector region 53..61 6/7 (86%)

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