DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8500 and CG30158

DIOPT Version :10

Sequence 1:NP_649948.1 Gene:CG8500 / 41203 FlyBaseID:FBgn0037754 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_652315.2 Gene:CG30158 / 50149 FlyBaseID:FBgn0050158 Length:280 Species:Drosophila melanogaster


Alignment Length:218 Identity:75/218 - (34%)
Similarity:109/218 - (50%) Gaps:33/218 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RVVVFGAGGVGKSSLVLRFIKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQFPAMQR 84
            |:|:.|..||||||:|.||:..|:.:.|..|:||.|.:..........:.|.||:|..|||||:|
  Fly     8 RLVLLGGAGVGKSSIVKRFLFKTYTDKYRATVEDLYNREYDLGGVTLKVDILDTSGDMQFPAMRR 72

  Fly    85 LSISKGHAFILVYSVCSKQSLEELRPIWALIKELKGADIPNIPVMLVGNKCDETAELREVSQAEG 149
            |||:..|||:|||:..|..|.:.::..:..|:|.:| |..:||:::.|||.|.....|||...| 
  Fly    73 LSIATAHAFMLVYAATSAPSFQCVKQCFEEIREQRG-DFQDIPIVIAGNKADLATTHREVKLEE- 135

  Fly   150 QAQATTW--------SISFMETSAKTNHNVTELFQELLNMEKTRTVSLQLDTKKQKKQKKEKKSK 206
               .|.|        ....:|.|||.:.|||:||:.||::.:....|                |.
  Fly   136 ---VTDWVFCELPRLRAKVLECSAKEDSNVTDLFKSLLSLSRFLPAS----------------SS 181

  Fly   207 DTNGSIPENGDAGASASGGAKEK 229
            .:.||    |..|.:|..|.|.:
  Fly   182 GSGGS----GGGGEAAPSGFKRR 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8500NP_649948.1 ARHI_like 18..183 CDD:206711 66/170 (39%)
CG30158NP_652315.2 Ras 8..172 CDD:206642 66/168 (39%)

Return to query results.
Submit another query.