DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8500 and Rergl

DIOPT Version :10

Sequence 1:NP_649948.1 Gene:CG8500 / 41203 FlyBaseID:FBgn0037754 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_001178908.1 Gene:Rergl / 500356 RGDID:1560090 Length:204 Species:Rattus norvegicus


Alignment Length:200 Identity:55/200 - (27%)
Similarity:86/200 - (43%) Gaps:26/200 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DYRVVVFGAGGVGKSSLVLRFIKGTFRESYIPTIEDTYRQVISCNKNIC------TLQITDTTGS 76
            |.::.|.|..|.|||:|.:||:...|...|....|..|      ||::|      .|:|.|....
  Rat     3 DVKLAVLGGRGTGKSALTVRFLTKRFIGEYASNFESIY------NKHLCLEGKPLNLEIYDPCSQ 61

  Fly    77 HQFPAMQRLS--ISKGHAFILVYSVCSKQSLEELRPIWALIKELKGADIPNI---PVMLVGNKCD 136
            .| .|...|:  :.....|::||.:.::.|....:.:...|:|........:   .|:|||||.|
  Rat    62 SQ-KAKGSLTSDLHWADGFVIVYDISNRPSFAFAKALIYRIREPPMTHCKRVMEPAVVLVGNKQD 125

  Fly   137 ETAELREVSQAEGQAQATTWSISFMETS-AKTNHNVTELFQELLNMEKTRTVSLQLDTKKQKKQK 200
             ...:|||...|||..||.:...|.|.| |:.:..:..:|..|:.      ..|.:...|:|::.
  Rat   126 -LCHMREVGWDEGQKLATDYRCQFCELSAAEQSLEIEVMFLRLIK------DILMIFKHKEKRRP 183

  Fly   201 KEKKS 205
            ...||
  Rat   184 SGSKS 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8500NP_649948.1 ARHI_like 18..183 CDD:206711 50/176 (28%)
RerglNP_001178908.1 RERG_RasL11_like 5..171 CDD:206713 49/179 (27%)

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