DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8500 and Rit1

DIOPT Version :10

Sequence 1:NP_649948.1 Gene:CG8500 / 41203 FlyBaseID:FBgn0037754 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_001383470.1 Gene:Rit1 / 499652 RGDID:1559874 Length:219 Species:Rattus norvegicus


Alignment Length:202 Identity:70/202 - (34%)
Similarity:111/202 - (54%) Gaps:12/202 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SNDYRVVVFGAGGVGKSSLVLRFIKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQFP 80
            |.:|::|:.||||||||::.::||...|.|.:.|||||.|:..|..:.....|.|.||.|..:|.
  Rat    19 SREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFT 83

  Fly    81 AMQRLSISKGHAFILVYSVCSKQSLEELRPIWALIKELKGADIPNIPVMLVGNKCDETAELREVS 145
            ||:...:..|..||:.||:..::|..|:|....||..::..|  :.||:|||||.| ..:||:||
  Rat    84 AMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTD--DTPVVLVGNKSD-LKQLRQVS 145

  Fly   146 QAEGQAQATTWSISFMETSAKTNHNVTELFQELLNMEKTRTVSLQLDTKKQKKQKKE-------- 202
            :.||.:.|..::..|.||||...:.:.::|..|:...:.:...|.|..:|:.|.|..        
  Rat   146 KEEGLSLAREFNCPFFETSAAYRYYIDDVFHALVREIRKKEKELVLAMEKKAKPKSSVWKRLKSP 210

  Fly   203 -KKSKDT 208
             ::.||:
  Rat   211 FRRKKDS 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8500NP_649948.1 ARHI_like 18..183 CDD:206711 62/164 (38%)
Rit1NP_001383470.1 Rit_Rin_Ric 20..191 CDD:206712 63/173 (36%)

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