DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8500 and ralab

DIOPT Version :10

Sequence 1:NP_649948.1 Gene:CG8500 / 41203 FlyBaseID:FBgn0037754 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_001007322.1 Gene:ralab / 492355 ZFINID:ZDB-GENE-041114-195 Length:202 Species:Danio rerio


Alignment Length:215 Identity:66/215 - (30%)
Similarity:112/215 - (52%) Gaps:23/215 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 YRVVVFGAGGVGKSSLVLRFIKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQFPAMQ 83
            ::|::.|:||||||:|.|:|:...|.|.|.||..|:||:.:..:.....:.|.||.|...:.|::
Zfish    11 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIR 75

  Fly    84 RLSISKGHAFILVYSVCSKQSLEELRPIWALIKELKGADIPNIPVMLVGNKCDETAELREVSQAE 148
            ......|..|:.|:|:...:|..........|..:|..:  |:|.:|||||.| ..:.|:|...|
Zfish    76 DNYFRSGEGFLCVFSITESESFAATADFREQILRVKEEE--NVPFLLVGNKSD-LEDRRQVGLEE 137

  Fly   149 GQAQATTWSISFMETSAKTNHNVTELFQELLNMEKTRTVSLQLDTKKQKKQKKEKKSKDTNGSIP 213
            .:|:|..|.:|::||||||..||.::|.:|:...:.|    :::..|:|..||::||..|.    
Zfish   138 AKARAEQWGVSYVETSAKTRANVDKVFFDLMREIRAR----KMEDGKEKNGKKKRKSLATR---- 194

  Fly   214 ENGDAGASASGGAKEKCRVM 233
                        .:|:|.::
Zfish   195 ------------IRERCCIL 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8500NP_649948.1 ARHI_like 18..183 CDD:206711 56/163 (34%)
ralabNP_001007322.1 RalA_RalB 11..173 CDD:206710 56/164 (34%)

Return to query results.
Submit another query.