DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8500 and rap1ab

DIOPT Version :10

Sequence 1:NP_649948.1 Gene:CG8500 / 41203 FlyBaseID:FBgn0037754 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_998570.2 Gene:rap1ab / 406714 ZFINID:ZDB-GENE-040426-2738 Length:185 Species:Danio rerio


Alignment Length:191 Identity:74/191 - (38%)
Similarity:119/191 - (62%) Gaps:13/191 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DYRVVVFGAGGVGKSSLVLRFIKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQFPAM 82
            :|::||.|:||||||:|.::|::|.|.|.|.|||||:||:.:..:...|.|:|.||.|:.||.||
Zfish     3 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAM 67

  Fly    83 QRLSISKGHAFILVYSVCSKQSLEELRPIWALIKELKGADIPNIPVMLVGNKCDETAELREVSQA 147
            :.|.:..|..|.||||:.::.:..:|:.:...|..:|  |..::|::|||||||...| |.|.:.
Zfish    68 RDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVK--DTEDVPMILVGNKCDLEDE-RVVGKE 129

  Fly   148 EGQAQATTW-SISFMETSAKTNHNVTELFQELLNMEKTRTVSLQLDTKKQKKQKKEKKSKD 207
            :||..|..| :.:|:|:|||:..||.::|.:|:.         |::.|...::||.||..:
Zfish   130 QGQNLARQWNNCAFLESSAKSKINVLDIFYDLVR---------QINRKTPVEKKKAKKKSN 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8500NP_649948.1 ARHI_like 18..183 CDD:206711 68/165 (41%)
rap1abNP_998570.2 Rap1 3..167 CDD:133375 69/175 (39%)

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