DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8500 and zgc:55558

DIOPT Version :10

Sequence 1:NP_649948.1 Gene:CG8500 / 41203 FlyBaseID:FBgn0037754 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_956552.1 Gene:zgc:55558 / 393228 ZFINID:ZDB-GENE-040426-740 Length:187 Species:Danio rerio


Alignment Length:186 Identity:68/186 - (36%)
Similarity:106/186 - (56%) Gaps:5/186 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DYRVVVFGAGGVGKSSLVLRFIKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQFPAM 82
            :|::||.||||||||:|.::.|:..|.:.|.|||||:||:.:..:...|.|.|.||.|..::.||
Zfish     3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAM 67

  Fly    83 QRLSISKGHAFILVYSVCSKQSLEELRPIWALIKELKGADIPNIPVMLVGNKCDETAELREVSQA 147
            :...:..|..|:.|:::.:.:|.|::......|..:|.:|  |:|::|||||.|.|:  |.|...
Zfish    68 RDQYMRTGEGFLCVFAINNAKSFEDVHLYREQINRVKDSD--NVPMVLVGNKSDLTS--RTVDTR 128

  Fly   148 EGQAQATTWSISFMETSAKTNHNVTELFQELLNMEKTRTVSLQLDTKKQKKQKKEK 203
            :.|..|.::.:.|:||||||...|.|.|..|:. |..|........||.||..:.:
Zfish   129 QAQELARSYGVPFVETSAKTRQGVEEAFYSLVR-EIRRYKETNRSNKKSKKHTQRR 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8500NP_649948.1 ARHI_like 18..183 CDD:206711 62/164 (38%)
zgc:55558NP_956552.1 H_N_K_Ras_like 3..164 CDD:133338 63/165 (38%)

Return to query results.
Submit another query.