DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8500 and rap1b

DIOPT Version :10

Sequence 1:NP_649948.1 Gene:CG8500 / 41203 FlyBaseID:FBgn0037754 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_955827.1 Gene:rap1b / 321107 ZFINID:ZDB-GENE-030131-9662 Length:184 Species:Danio rerio


Alignment Length:189 Identity:77/189 - (40%)
Similarity:117/189 - (61%) Gaps:13/189 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DYRVVVFGAGGVGKSSLVLRFIKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQFPAM 82
            :|::||.|:||||||:|.::|::|.|.|.|.|||||:||:.:..:...|.|:|.||.|:.||.||
Zfish     3 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAM 67

  Fly    83 QRLSISKGHAFILVYSVCSKQSLEELRPIWALIKELKGADIPNIPVMLVGNKCDETAELREVSQA 147
            :.|.:..|..|.||||:.::.:..:|:.:...|..:||.|  ::|::|||||||...| |.|.:.
Zfish    68 RDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKGTD--DVPMILVGNKCDLEDE-RVVGKE 129

  Fly   148 EGQAQATTW-SISFMETSAKTNHNVTELFQELLNMEKTRTVSLQLDTKKQKKQKKEKKS 205
            :||..|..| |.:|:|:|||:..||.|:|.:|:.         |::.|.....|..|||
Zfish   130 QGQNLARQWNSCAFLESSAKSKINVNEIFYDLVR---------QINRKTPVTGKPRKKS 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8500NP_649948.1 ARHI_like 18..183 CDD:206711 71/165 (43%)
rap1bNP_955827.1 Rap1 3..167 CDD:133375 72/175 (41%)
Effector region. /evidence=ECO:0000305 32..40 6/7 (86%)

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