DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8500 and Hras

DIOPT Version :10

Sequence 1:NP_649948.1 Gene:CG8500 / 41203 FlyBaseID:FBgn0037754 Length:233 Species:Drosophila melanogaster
Sequence 2:XP_006230597.3 Gene:Hras / 293621 RGDID:2827 Length:290 Species:Rattus norvegicus


Alignment Length:204 Identity:71/204 - (34%)
Similarity:113/204 - (55%) Gaps:20/204 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AAP-EQSNDYRVVVFGAGGVGKSSLVLRFIKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTT 74
            ||| |...:|::||.||||||||:|.::.|:..|.:.|.|||||:||:.:..:...|.|.|.||.
  Rat    96 AAPVEAMTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTA 160

  Fly    75 GSHQFPAMQRLSISKGHAFILVYSVCSKQSLEELRPIWALIKELKGADIPNIPVMLVGNKCDETA 139
            |..::.||:...:..|..|:.|:::.:.:|.|::......||.:|.:|  ::|::|||||||..|
  Rat   161 GQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSD--DVPMVLVGNKCDLAA 223

  Fly   140 ELREVSQAEGQAQATTWSISFMETSAKTNHNVTELFQELLNMEKTRTVSLQLDTKKQKKQKKEKK 204
              |.|...:.|..|.::.|.::||||||...|.:.|..|:               ::.:|.|.:|
  Rat   224 --RTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLV---------------REIRQHKLRK 271

  Fly   205 SKDTNGSIP 213
            ....:.|.|
  Rat   272 LNPPDESGP 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8500NP_649948.1 ARHI_like 18..183 CDD:206711 62/164 (38%)
HrasXP_006230597.3 H_N_K_Ras_like 104..265 CDD:133338 62/179 (35%)

Return to query results.
Submit another query.