DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8500 and rap-2

DIOPT Version :10

Sequence 1:NP_649948.1 Gene:CG8500 / 41203 FlyBaseID:FBgn0037754 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_506707.2 Gene:rap-2 / 180011 WormBaseID:WBGene00004308 Length:181 Species:Caenorhabditis elegans


Alignment Length:189 Identity:76/189 - (40%)
Similarity:112/189 - (59%) Gaps:16/189 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DYRVVVFGAGGVGKSSLVLRFIKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQFPAM 82
            :::|||.|:||||||:|.::|:..||.|.|.|||||.||:.|..:.....|:|.||.|:.||.:|
 Worm     3 EFKVVVLGSGGVGKSALTVQFVSSTFIEKYDPTIEDFYRKEIEVDGQPSVLEILDTAGTEQFSSM 67

  Fly    83 QRLSISKGHAFILVYSVCSKQSLEELRPIWALIKELKGADIPNIPVMLVGNKCDETAELREVSQA 147
            :.|.|..|..|::|||:.|:|:..::|.:...|..:||::  |:|::||||||| .:..|:|...
 Worm    68 RDLYIKNGQGFVVVYSITSQQTFHDIRNMKEQIVRVKGSE--NVPILLVGNKCD-LSHQRQVRSE 129

  Fly   148 EGQAQATTWSISFMETSAKTNHNVTELFQELLNMEKTRTVSLQLDTKKQKKQKKEKKSK 206
            ||.|.|.:||..|.|.|||.|.||...|.|::.             :....|.|.::||
 Worm   130 EGLALAESWSCPFTECSAKNNQNVNVTFAEIVR-------------EMNYVQNKSRQSK 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8500NP_649948.1 ARHI_like 18..183 CDD:206711 72/164 (44%)
rap-2NP_506707.2 Rap2 16..165 CDD:133376 64/164 (39%)

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