DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8500 and Rala

DIOPT Version :10

Sequence 1:NP_649948.1 Gene:CG8500 / 41203 FlyBaseID:FBgn0037754 Length:233 Species:Drosophila melanogaster
Sequence 2:XP_320421.4 Gene:Rala / 1280568 VectorBaseID:AGAMI1_004718 Length:201 Species:Anopheles gambiae


Alignment Length:212 Identity:69/212 - (32%)
Similarity:110/212 - (51%) Gaps:25/212 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 YRVVVFGAGGVGKSSLVLRFIKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQFPAMQ 83
            ::|::.|:||||||:|.|:|:...|.|.|.||..|:||:.:..:.....:.|.||.|...:.|::
Mosquito    12 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIR 76

  Fly    84 RLSISKGHAFILVYSVCSKQSLEELRPIWALIKELKGADIPNIPVMLVGNKCDETAELREVSQAE 148
            ......|..|:.|:|:....|.:..:.....|..:|..:  |||.:||||||| ..:.|:|..||
Mosquito    77 DNYFRSGEGFLCVFSITEDDSFQATQEFREQILRVKNDE--NIPFLLVGNKCD-LNDKRKVPLAE 138

  Fly   149 GQAQATTWSISFMETSAKTNHNVTELFQELLNMEKTRTVSLQLDTKKQKKQKKEKKSKDTNGSIP 213
            .|::|..|.:.::||||||..||.::|.:|:               :|.:.:|.:.||.|||.:.
Mosquito   139 CQSRAQQWGVPYVETSAKTRENVDKVFFDLM---------------RQIRSRKTEDSKTTNGRVK 188

  Fly   214 ENGDAGASASGGAKEKC 230
            :.       |...|.||
Mosquito   189 DK-------SKRRKIKC 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8500NP_649948.1 ARHI_like 18..183 CDD:206711 58/163 (36%)
RalaXP_320421.4 None

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