DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpS29 and rps29

DIOPT Version :10

Sequence 1:NP_649946.1 Gene:RpS29 / 41200 FlyBaseID:FBgn0261599 Length:56 Species:Drosophila melanogaster
Sequence 2:NP_001016766.1 Gene:rps29 / 549520 XenbaseID:XB-GENE-1016214 Length:56 Species:Xenopus tropicalis


Alignment Length:56 Identity:44/56 - (78%)
Similarity:49/56 - (87%) Gaps:0/56 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFATLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIGFKKLD 56
            ||...|::|||||:|||||.||.||||||||||||||:||||||:||.||||.|||
 Frog     1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS29NP_649946.1 PTZ00218 6..56 CDD:185518 40/49 (82%)
rps29NP_001016766.1 PTZ00218 1..56 CDD:185518 42/54 (78%)

Return to query results.
Submit another query.