DRSC/TRiP Functional Genomics Resources

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Protein Alignment topi and AZF1

DIOPT Version :10

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:NP_014756.3 Gene:AZF1 / 854280 SGDID:S000005639 Length:914 Species:Saccharomyces cerevisiae


Alignment Length:639 Identity:120/639 - (18%)
Similarity:200/639 - (31%) Gaps:238/639 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 VPQQEKPHLVPTVSAPPAPLSKPASERVIRENQVRLRRYIKDEMKYDLATGIESSRKNAAKGPNE 229
            :|.||...|..|.:.       ..|.:.::|.:.|||:::.||..|..|......:.:..:|   
Yeast   396 IPNQEDHSLASTDTT-------SNSRKDLKEIEQRLRKHLNDEDNYSSAISRPLDKNDVIEG--- 450

  Fly   230 CTMCDRKFVHASGLVRHMEKHALDLIPSQTSEQPHTIPAAGLHVVVKCNSCGRIFYDPQVAFRHG 294
                      :.||.:|:::..:         ||:.|                            
Yeast   451 ----------SEGLNKHIDESGM---------QPNII---------------------------- 468

  Fly   295 LIHDSEHSTMRQSPMTQVPSNRADFNELLLDGEMLIDNDPAFATSNQNTNPPKKEMFSSLILGSV 359
                              ...:.|.:.:.:..||            ..|:||..:..|:...|:.
Yeast   469 ------------------KKRKKDDSTVYVKNEM------------PRTDPPMSKDNSTSAEGAA 503

  Fly   360 LQCEFC--EYIFADIAELLVHSASHVAERRFECTACDIQMNTAKEASIHFQTDCIFMREAIRSLN 422
            : ..|.  |....||:     |.|..|......|..|..|                         
Yeast   504 M-ANFSGKEPPIPDIS-----SVSDDATNLIGATKVDQLM------------------------- 537

  Fly   423 VTLSRYFVCNVCELKFANTDLLQEHRCTSFHYFPRLNENGKKLLLPCDFCDVNFEFAHDFLAHSE 487
                                |:.:.|...|.......::|          |:.|....|.|....
Yeast   538 --------------------LIIQARKKGFTEKVNTTQDG----------DLLFNQTMDILPPKS 572

  Fly   488 EKHLNKKKREKETRNTGAGRIRQYLCDICGKSYTQSSHLWQHLRFHQGVKPFVCQEENCDRKFTI 552
            |. :...::.|.|:||.|  ::::.|..|.:.::|::||..|:|.|.|.|||||.          
Yeast   573 EL-VGGVEKPKGTQNTRA--VKKHECPYCHRLFSQATHLEVHVRSHIGYKPFVCD---------- 624

  Fly   553 RPDLNDHIRKCHTGERPYLCLVCGKRFLTGSVFYQHRLIHRGERRYECEECGKRFYRADALKNHQ 617
                                 .|||||..|.....|..:|.||:.|.|:.|.|:|.|...|..|.
Yeast   625 ---------------------YCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHL 668

  Fly   618 RIHTGEKPYSCLF--CTKTFRQRGDRDKHIRARHSH-LDANSRLMMQM---QKFQLET------- 669
            ..|...||:.|..  |.|||.|.|:...|....|.. |:|.:..:.:|   :...||.       
Yeast   669 VTHQKLKPFVCKLENCNKTFTQLGNMKAHQNRFHKETLNALTAKLAEMNPSENIPLEERQLLEYF 733

  Fly   670 -----------------AAAQKAQSHNPEQQ------------DNDVAGGASTSDVPSGS--GFM 703
                             ...:|:...:||..            :|.:|..:..:..|.|:  ...
Yeast   734 ASIYKNSNRGIKGRGKGVGTKKSTISSPENHPASTILNPNTNANNAIANDSENNGNPEGNIDSSS 798

  Fly   704 STEPSVAEMQYSITPEQQEEMVCVPIDEVNNSFFMSHYMQAVPMEEDGSGQHII 757
            ::.|....|   |:|.|::      :..:.:.|..:::..:| ...:.|.|.||
Yeast   799 NSNPGSHSM---ISPTQKD------MGTLQSQFIQNNFNNSV-NSSNPSNQPII 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275370 3/19 (16%)
C2H2 Zn finger 277..297 CDD:275370 0/19 (0%)
C2H2 Zn finger 431..453 CDD:275368 2/21 (10%)
COG5048 <450..647 CDD:227381 55/198 (28%)
C2H2 Zn finger 469..490 CDD:275368 5/20 (25%)
C2H2 Zn finger 513..564 CDD:275368 14/50 (28%)
C2H2 Zn finger 541..561 CDD:275368 1/19 (5%)
C2H2 Zn finger 572..592 CDD:275368 7/19 (37%)
C2H2 Zn finger 600..620 CDD:275368 7/19 (37%)
zf-H2C2_2 612..637 CDD:463886 10/26 (38%)
C2H2 Zn finger 628..646 CDD:275368 8/19 (42%)
AZF1NP_014756.3 COG5048 342..768 CDD:227381 105/553 (19%)
C2H2 Zn finger 595..615 CDD:275368 7/19 (37%)
C2H2 Zn finger 623..643 CDD:275368 8/50 (16%)
C2H2 Zn finger 651..671 CDD:275368 7/19 (37%)
C2H2 Zn finger 679..702 CDD:275368 8/22 (36%)

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