Sequence 1: | NP_649945.1 | Gene: | topi / 41199 | FlyBaseID: | FBgn0037751 | Length: | 814 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_010235.1 | Gene: | STP4 / 851512 | SGDID: | S000002206 | Length: | 490 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 473 | Identity: | 98/473 - (20%) |
---|---|---|---|
Similarity: | 151/473 - (31%) | Gaps: | 155/473 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 PDDLQPGATVLATNEST----------GGLERIVSHEELSRFFAVGPAGALPMPTDVV----VER 74
Fly 75 TLADPAFKQILQEADGKKGFDPQAEQMKIRDFLAGVTSSKMTTEQSVFHGSRSNSSASTVNRIKC 139
Fly 140 PTCLVQFDAVAFQNHSCEAKPIE----VAVPQQEKPHLVPTVSAPPAP-LSKPASERVIRENQVR 199
Fly 200 LRRYIKDEMKYDLATGIESSRKNAAKGPNECTMCDRKFVHASGLVRHMEKHALDLIPSQTSEQPH 264
Fly 265 TIPAAGLHVVVKCNSCGRIFYDPQVAFRHGLIH-------------------DSEHSTMRQSPMT 310
Fly 311 QVPSNRADFNELLLDGEMLIDNDPAFATSNQNTNPPKKEMFSSLI-LGSVLQCEFCEYIFADIAE 374
Fly 375 LLVHSASHVAERRFEC------TACDIQMNTAKEASIHFQTDCIFMREAIRSLNVTLSRYFV--- 430
Fly 431 CNVCELKFANTDL-LQEH 447 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
topi | NP_649945.1 | C2H2 Zn finger | 230..250 | CDD:275368 | 4/19 (21%) |
C2H2 Zn finger | 277..297 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 431..453 | CDD:275368 | 8/18 (44%) | ||
COG5048 | <450..647 | CDD:227381 | |||
C2H2 Zn finger | 469..490 | CDD:275368 | |||
zf-C2H2 | 511..533 | CDD:278523 | |||
C2H2 Zn finger | 513..564 | CDD:275368 | |||
C2H2 Zn finger | 541..561 | CDD:275368 | |||
zf-H2C2_2 | 555..581 | CDD:290200 | |||
C2H2 Zn finger | 572..592 | CDD:275368 | |||
zf-H2C2_2 | 585..609 | CDD:290200 | |||
zf-C2H2 | 598..620 | CDD:278523 | |||
C2H2 Zn finger | 600..620 | CDD:275368 | |||
zf-H2C2_2 | 612..637 | CDD:290200 | |||
C2H2 Zn finger | 628..646 | CDD:275368 | |||
STP4 | NP_010235.1 | COG5048 | 14..442 | CDD:227381 | 85/424 (20%) |
C2H2 Zn finger | 279..296 | CDD:275368 | 4/19 (21%) | ||
C2H2 Zn finger | 306..326 | CDD:275368 | 6/19 (32%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24390 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |