DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment topi and ZNF671

DIOPT Version :9

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:NP_079109.2 Gene:ZNF671 / 79891 HGNCID:26279 Length:534 Species:Homo sapiens


Alignment Length:625 Identity:138/625 - (22%)
Similarity:230/625 - (36%) Gaps:170/625 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 ERIVSHEELSRFFAVGPAGALPMPTDVVV---ERTLADPAFKQI----LQEADGKKGFDPQAEQM 101
            :|::.|:.:...||:..:..:.......|   ||......:.|:    ..|.:.::|..|.... 
Human    70 QRLLYHDVMLENFALLASLGIAFSRSRAVMKLERGEEPWVYDQVDMTSATEREAQRGLRPGCWH- 133

  Fly   102 KIRDFLAGVTSSKMTTEQSVFHGSRSNSSASTVNRIKCPTCLVQFDAVAFQNHSCEAKPIEVAVP 166
                   ||...::::|||:|        .:.|:.::  |.:.:     .::|.|:         
Human   134 -------GVEDEEVSSEQSIF--------VAGVSEVR--TLMAE-----LESHPCD--------- 167

  Fly   167 QQEKPHLVPTVSAPPAPLSKPASERVIRENQVRLRRYIKDEMKYDLATGIESSRKNAAKGPNECT 231
                      :..|            |.::.:.|.:|          .|.::.:|     |..|.
Human   168 ----------ICGP------------ILKDTLHLAKY----------HGGKARQK-----PYLCG 195

  Fly   232 MCDRKFVHASGLVRHM-EKHALDLIPSQTSEQPHTIPAAGLHVVVKCNSCGRIFYDPQVAFRHGL 295
            .|.::|..::...:|. :.:...|.|.:  |...::.:..:||..|..:||:...|  .:...||
Human   196 ACGKQFWFSTDFDQHQNQPNGGKLFPRK--EGRDSVKSCRVHVPEKTLTCGKGRRD--FSATSGL 256

  Fly   296 I-HDSEHSTMRQSPMTQVPSNRADFNELLLDGEMLIDNDPAFATSNQNTNPPKKEMFSSLILGS- 358
            : |.:..|:|:....|                                      ::.|..::|. 
Human   257 LQHQASLSSMKPHKST--------------------------------------KLVSGFLMGQR 283

  Fly   359 VLQCEFCEYIFADIAELLVHSASHVAERRFECTACDIQMNTAKEASIHFQTDCIFMREAIRSLNV 423
            ..:|..|...|.....|..|...|..||.:||..|         .....|:..:|..:.:.    
Human   284 YHRCGECGKAFTRKDTLARHQRIHTGERPYECNEC---------GKFFSQSYDLFKHQTVH---- 335

  Fly   424 TLSRYFVCNVCELKFANTDLLQEHRCTSFHYFPRLNENGKKLLLPCDFCDVNFEFAHDFLAHSEE 488
            |..|.:.|:.|...|.....|.|||  ..|...||.:.||        |...|....:.:.|.|.
Human   336 TGERPYECSECGKFFRQISGLIEHR--RVHTGERLYQCGK--------CGKFFSSKSNLIRHQEV 390

  Fly   489 KHLNKKKREKETRNTGAGRIRQYLCDICGKSYTQSSHLWQHLRFHQGVKPFVCQEENCDRKFTIR 553
                         :|||   |.|:|..|||.:::...|..|.|.|.|.:|:.|.|  |.:.|:..
Human   391 -------------HTGA---RPYVCSECGKEFSRKHTLVLHQRTHTGERPYECSE--CGKAFSQS 437

  Fly   554 PDLNDHIRKCHTGERPYLCLVCGKRFLTGSVFYQHRLIHRGERRYECEECGKRFYRADALKNHQR 618
            ..||.|.| .|:.:  |.|..|||.|...|...||:.:|.||:.|||.:|||.|.:...|..|.:
Human   438 SHLNVHWR-IHSSD--YECSRCGKAFSCISKLIQHQKVHSGEKPYECSKCGKAFTQRPNLIRHWK 499

  Fly   619 IHTGEKPYSCLFCTKTFRQRGDRDKHIRARHSHLDANSRL 658
            :||||:||.|..|.:.|.:     |.....|..:.|..:|
Human   500 VHTGERPYVCSECGREFIR-----KQTLVLHQRVHAGEKL 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275368 4/20 (20%)
C2H2 Zn finger 277..297 CDD:275368 5/20 (25%)
C2H2 Zn finger 431..453 CDD:275368 7/21 (33%)
COG5048 <450..647 CDD:227381 64/196 (33%)
C2H2 Zn finger 469..490 CDD:275368 4/20 (20%)
zf-C2H2 511..533 CDD:278523 8/21 (38%)
C2H2 Zn finger 513..564 CDD:275368 18/50 (36%)
C2H2 Zn finger 541..561 CDD:275368 7/19 (37%)
zf-H2C2_2 555..581 CDD:290200 11/25 (44%)
C2H2 Zn finger 572..592 CDD:275368 8/19 (42%)
zf-H2C2_2 585..609 CDD:290200 12/23 (52%)
zf-C2H2 598..620 CDD:278523 9/21 (43%)
C2H2 Zn finger 600..620 CDD:275368 7/19 (37%)
zf-H2C2_2 612..637 CDD:290200 11/24 (46%)
C2H2 Zn finger 628..646 CDD:275368 4/17 (24%)
ZNF671NP_079109.2 KRAB 49..109 CDD:214630 7/38 (18%)
KRAB 49..88 CDD:279668 4/17 (24%)
C2H2 Zn finger 243..269 CDD:275368 8/27 (30%)
COG5048 <285..443 CDD:227381 52/198 (26%)
zf-C2H2 285..307 CDD:278523 5/21 (24%)
C2H2 Zn finger 287..307 CDD:275368 5/19 (26%)
zf-H2C2_2 300..324 CDD:290200 8/32 (25%)
C2H2 Zn finger 315..335 CDD:275368 4/28 (14%)
zf-H2C2_2 327..352 CDD:290200 6/28 (21%)
C2H2 Zn finger 343..363 CDD:275368 7/21 (33%)
zf-C2H2 369..391 CDD:278523 6/42 (14%)
C2H2 Zn finger 371..391 CDD:275368 6/40 (15%)
zf-C2H2 397..419 CDD:278523 8/21 (38%)
C2H2 Zn finger 399..419 CDD:275368 7/19 (37%)
zf-H2C2_2 412..436 CDD:290200 10/25 (40%)
C2H2 Zn finger 427..447 CDD:275368 8/22 (36%)
C2H2 Zn finger 453..473 CDD:275368 8/19 (42%)
zf-H2C2_2 466..490 CDD:290200 12/23 (52%)
C2H2 Zn finger 481..501 CDD:275368 7/19 (37%)
C2H2 Zn finger 509..529 CDD:275368 5/24 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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