Sequence 1: | NP_649945.1 | Gene: | topi / 41199 | FlyBaseID: | FBgn0037751 | Length: | 814 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001070629.1 | Gene: | znf438 / 798757 | ZFINID: | ZDB-GENE-060929-868 | Length: | 746 | Species: | Danio rerio |
Alignment Length: | 775 | Identity: | 142/775 - (18%) |
---|---|---|---|
Similarity: | 258/775 - (33%) | Gaps: | 253/775 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 60 PAGALPMPTDVVVERTLADPAFKQILQEADGKKG-FD----PQAEQM------------------ 101
Fly 102 ----------KIR-------------DFLAGVTSSKMTTEQSVFHGSRSNSSASTV--------- 134
Fly 135 ----------------------------------NRIKCPTCLVQFDAVAFQNHSCEAKPIE-VA 164
Fly 165 VPQQEKPHLVP------TVSAPPAPLSKPASERVI-----------RENQVRLRRYIKDEMKYD- 211
Fly 212 LATGIESS--RKNAAKGP--NECTMCDRKFVHASGLVRHMEKHALDLIPSQTSEQPHTIPAAGLH 272
Fly 273 VVVKCNSCGRIFYDPQVAFRHGLIHDSEHSTMRQSP----------MTQVPSNRADFN--ELLLD 325
Fly 326 GEMLIDNDPAFATSNQNTNPPKKEMFSSLILGSVLQCEFCEYIFADIAELLVHSASHVAERRFEC 390
Fly 391 TACDIQMNTAKEASIHFQTDCIFMREAIRSLNVTLS-RYFVCNVCELKFANTDLLQEHRCTSFHY 454
Fly 455 FPRLNENGKKLLLPCDFCDVNFEFAHDFLAHSEEKHLNKKKREKETRNTGAGRIRQYLCDICGKS 519
Fly 520 YTQSSHLWQHLRFHQGVKPFVCQEENCDRKFTIRP---DLNDHIRKCHTGERPYLCLVCGKRF-- 579
Fly 580 ------LTGSVFYQHRLIHRGERRYECEECGKRFYRADALKNHQRIHTGEKP------------- 625
Fly 626 -----------------YSCLFCTKTFRQRGDRDKHIRARHSHLDANSRLMMQMQKFQLE 668 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
topi | NP_649945.1 | C2H2 Zn finger | 230..250 | CDD:275368 | 4/19 (21%) |
C2H2 Zn finger | 277..297 | CDD:275368 | 3/19 (16%) | ||
C2H2 Zn finger | 431..453 | CDD:275368 | 6/21 (29%) | ||
COG5048 | <450..647 | CDD:227381 | 46/237 (19%) | ||
C2H2 Zn finger | 469..490 | CDD:275368 | 6/20 (30%) | ||
zf-C2H2 | 511..533 | CDD:278523 | 4/21 (19%) | ||
C2H2 Zn finger | 513..564 | CDD:275368 | 14/53 (26%) | ||
C2H2 Zn finger | 541..561 | CDD:275368 | 7/22 (32%) | ||
zf-H2C2_2 | 555..581 | CDD:290200 | 7/33 (21%) | ||
C2H2 Zn finger | 572..592 | CDD:275368 | 4/27 (15%) | ||
zf-H2C2_2 | 585..609 | CDD:290200 | 4/23 (17%) | ||
zf-C2H2 | 598..620 | CDD:278523 | 5/21 (24%) | ||
C2H2 Zn finger | 600..620 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 612..637 | CDD:290200 | 8/54 (15%) | ||
C2H2 Zn finger | 628..646 | CDD:275368 | 5/17 (29%) | ||
znf438 | NP_001070629.1 | zf-C2H2 | 452..474 | CDD:278523 | 7/38 (18%) |
C2H2 Zn finger | 454..474 | CDD:275368 | 6/33 (18%) | ||
zf-H2C2_2 | 466..491 | CDD:290200 | 8/34 (24%) | ||
C2H2 Zn finger | 482..502 | CDD:275368 | 6/21 (29%) | ||
C2H2 Zn finger | 514..532 | CDD:275368 | 5/17 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24390 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |