DRSC/TRiP Functional Genomics Resources

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Protein Alignment topi and znf574

DIOPT Version :9

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:NP_001164307.1 Gene:znf574 / 798589 ZFINID:ZDB-GENE-100922-259 Length:1009 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275368
C2H2 Zn finger 277..297 CDD:275368
C2H2 Zn finger 431..453 CDD:275368
COG5048 <450..647 CDD:227381
C2H2 Zn finger 469..490 CDD:275368
zf-C2H2 511..533 CDD:278523
C2H2 Zn finger 513..564 CDD:275368
C2H2 Zn finger 541..561 CDD:275368
zf-H2C2_2 555..581 CDD:290200
C2H2 Zn finger 572..592 CDD:275368
zf-H2C2_2 585..609 CDD:290200
zf-C2H2 598..620 CDD:278523
C2H2 Zn finger 600..620 CDD:275368
zf-H2C2_2 612..637 CDD:290200
C2H2 Zn finger 628..646 CDD:275368
znf574NP_001164307.1 PRK10905 <56..>233 CDD:236792
C2H2 Zn finger 235..255 CDD:275370
C2H2 Zn finger 265..285 CDD:275370
CpXC 429..>480 CDD:291051
C2H2 Zn finger 429..450 CDD:275368
C2H2 Zn finger 459..479 CDD:275368
C2H2 Zn finger 533..553 CDD:275368
COG5048 557..905 CDD:227381
C2H2 Zn finger 561..581 CDD:275368
zf-C2H2 587..609 CDD:278523
C2H2 Zn finger 589..609 CDD:275368
C2H2 Zn finger 636..656 CDD:275368
C2H2 Zn finger 663..683 CDD:275368
C2H2 Zn finger 691..708 CDD:275368
C2H2 Zn finger 735..755 CDD:275370
C2H2 Zn finger 763..785 CDD:275368
zf-C2H2 799..821 CDD:278523
C2H2 Zn finger 801..821 CDD:275368
zf-H2C2_2 816..838 CDD:290200
C2H2 Zn finger 829..849 CDD:275368
zf-H2C2_2 841..865 CDD:290200
C2H2 Zn finger 857..877 CDD:275368
C2H2 Zn finger 885..905 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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