Sequence 1: | NP_649945.1 | Gene: | topi / 41199 | FlyBaseID: | FBgn0037751 | Length: | 814 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001171975.1 | Gene: | E4f1 / 681359 | RGDID: | 1596731 | Length: | 783 | Species: | Rattus norvegicus |
Alignment Length: | 751 | Identity: | 153/751 - (20%) |
---|---|---|---|
Similarity: | 253/751 - (33%) | Gaps: | 224/751 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 138 KCPTCLVQFDAVA-FQNH----SC-----EAKPIEVAVPQQEKPHLVPTVS--APPAPLS----- 185
Fly 186 ----------------------------------------KPASER-----VIRE-NQVRLRRYI 204
Fly 205 KDEMKY-------DLATG--------IESSRKNAAKGPNECTMCDRKFVHASGLVRHMEKHALDL 254
Fly 255 IPSQTSEQPHTIPAAGLHVVVKCNSCGRIFYDPQVAFRHGLIHDSEHSTMRQSPMTQVPSNRADF 319
Fly 320 NELLLDGEMLIDNDPAFATSNQNTNPPKKEMFSSLILGSVLQCEFCEYIFADIAELLVHSASHVA 384
Fly 385 ERRF------------ECTACDIQMNTAKEASIHFQTDCIFMREAIRSLNVTLSRY--------- 428
Fly 429 ----------FVCNVCELKFANTDLLQEHRCTSFHYFPRLNENGKKLLLPCDFCDVNFEFAHDFL 483
Fly 484 AHSEEKHLNKKKREKETRNTGAGRI--RQYLCDICGKSYTQSSHLWQHLRFHQGVKPFVCQEENC 546
Fly 547 DRKFTIRPDLNDHIRKCHTGERPYLCLVCGKRFLTGSVFYQHRLIHRGERRYECEECGKRFYRAD 611
Fly 612 ALKNHQRIHTGEKPYSCLFCTKTFRQRGDRDKHIRARHSHLDANSRLMMQMQKFQLETAAAQKAQ 676
Fly 677 SHNPEQQDNDVAGGASTSDVPSGSGFMSTEPSVAEMQYSITPEQQEEMVCVPIDEVNNSFFMSHY 741
Fly 742 MQAVP--MEEDGSGQHIIVFEQPGQNMDMMSIYDQQ 775 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
topi | NP_649945.1 | C2H2 Zn finger | 230..250 | CDD:275368 | 6/19 (32%) |
C2H2 Zn finger | 277..297 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 431..453 | CDD:275368 | 2/21 (10%) | ||
COG5048 | <450..647 | CDD:227381 | 56/198 (28%) | ||
C2H2 Zn finger | 469..490 | CDD:275368 | 6/20 (30%) | ||
zf-C2H2 | 511..533 | CDD:278523 | 6/21 (29%) | ||
C2H2 Zn finger | 513..564 | CDD:275368 | 12/50 (24%) | ||
C2H2 Zn finger | 541..561 | CDD:275368 | 3/19 (16%) | ||
zf-H2C2_2 | 555..581 | CDD:290200 | 11/25 (44%) | ||
C2H2 Zn finger | 572..592 | CDD:275368 | 7/19 (37%) | ||
zf-H2C2_2 | 585..609 | CDD:290200 | 6/23 (26%) | ||
zf-C2H2 | 598..620 | CDD:278523 | 6/21 (29%) | ||
C2H2 Zn finger | 600..620 | CDD:275368 | 6/19 (32%) | ||
zf-H2C2_2 | 612..637 | CDD:290200 | 12/24 (50%) | ||
C2H2 Zn finger | 628..646 | CDD:275368 | 5/17 (29%) | ||
E4f1 | NP_001171975.1 | COG5048 | 193..594 | CDD:227381 | 101/483 (21%) |
C2H2 Zn finger | 195..215 | CDD:275368 | 2/19 (11%) | ||
zf-C2H2 | 221..243 | CDD:278523 | 7/21 (33%) | ||
C2H2 Zn finger | 223..243 | CDD:275368 | 6/19 (32%) | ||
zf-H2C2_2 | 235..258 | CDD:290200 | 11/41 (27%) | ||
C2H2 Zn finger | 251..269 | CDD:275368 | 6/26 (23%) | ||
C2H2 Zn finger | 436..456 | CDD:275368 | 8/37 (22%) | ||
zf-H2C2_2 | 449..471 | CDD:290200 | 11/39 (28%) | ||
zf-C2H2 | 462..484 | CDD:278523 | 6/21 (29%) | ||
C2H2 Zn finger | 464..484 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 492..512 | CDD:275368 | 4/22 (18%) | ||
zf-H2C2_2 | 504..529 | CDD:290200 | 11/25 (44%) | ||
C2H2 Zn finger | 520..540 | CDD:275368 | 7/19 (37%) | ||
C2H2 Zn finger | 548..568 | CDD:275368 | 6/19 (32%) | ||
zf-H2C2_2 | 560..584 | CDD:290200 | 11/23 (48%) | ||
C2H2 Zn finger | 576..595 | CDD:275368 | 5/18 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24390 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |