DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment topi and zbtb40

DIOPT Version :9

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:XP_002937082.3 Gene:zbtb40 / 548670 XenbaseID:XB-GENE-967576 Length:1352 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275368
C2H2 Zn finger 277..297 CDD:275368
C2H2 Zn finger 431..453 CDD:275368
COG5048 <450..647 CDD:227381
C2H2 Zn finger 469..490 CDD:275368
zf-C2H2 511..533 CDD:278523
C2H2 Zn finger 513..564 CDD:275368
C2H2 Zn finger 541..561 CDD:275368
zf-H2C2_2 555..581 CDD:290200
C2H2 Zn finger 572..592 CDD:275368
zf-H2C2_2 585..609 CDD:290200
zf-C2H2 598..620 CDD:278523
C2H2 Zn finger 600..620 CDD:275368
zf-H2C2_2 612..637 CDD:290200
C2H2 Zn finger 628..646 CDD:275368
zbtb40XP_002937082.3 BTB_POZ_ZBTB40 1..116 CDD:349534
C2H2 Zn finger 874..904 CDD:275368
COG5048 <913..1075 CDD:227381
C2H2 Zn finger 914..935 CDD:275368
C2H2 Zn finger 943..963 CDD:275368
C2H2 Zn finger 971..1020 CDD:275368
zf-H2C2_2 1012..1037 CDD:404364
SFP1 <1022..1136 CDD:227516
C2H2 Zn finger 1028..1047 CDD:275368
C2H2 Zn finger 1057..1078 CDD:275370
C2H2 Zn finger 1085..1104 CDD:275368
SFP1 <1106..1173 CDD:227516
C2H2 Zn finger 1113..1133 CDD:275368
zf-C2H2_8 1152..1233 CDD:406359
C2H2 Zn finger 1152..1170 CDD:275368
C2H2 Zn finger 1181..1202 CDD:275368
C2H2 Zn finger 1210..1229 CDD:275368
C2H2 Zn finger 1241..1257 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.