DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment topi and ZNF749

DIOPT Version :9

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:NP_001018855.2 Gene:ZNF749 / 388567 HGNCID:32783 Length:778 Species:Homo sapiens


Alignment Length:610 Identity:144/610 - (23%)
Similarity:218/610 - (35%) Gaps:187/610 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 AFKQILQEADGKKGF-------DPQAEQMKIRDFLAGVTSSKMTTEQSVFHGSRSNSSASTVNRI 137
            |...:||:.....|:       |.:|.|.:..||.:.........:..:|...::::........
Human   163 ASSDLLQQQVLNSGWKLYRDTQDGEAFQGEQNDFNSSQGGKDFCHQHGLFEHQKTHNGERPYEFS 227

  Fly   138 KC------PTCLVQFDAVAFQNHSCEAKPIEVA-----------VPQQEKPHLVPTVSAPPAPLS 185
            :|      .:.|:::.    |||:.| :|.|..           :.|.:|.|....:|....|: 
Human   228 ECGELFRYNSNLIKYQ----QNHAGE-RPYEGTEYGKTFIRKSNLVQHQKIHSEGFLSKRSDPI- 286

  Fly   186 KPASERVIRENQVRLRRYIKDEMKYDLATGIESSRKNAAKGPNECTMCDRKFVHASGLVRHMEKH 250
                     |:|..|.|                      ..|.|||.|.:.|:..:.||.|.:.|
Human   287 ---------EHQEILSR----------------------PTPYECTQCGKAFLTQAHLVGHQKTH 320

  Fly   251 ALDLIPSQTSEQPHTIPAAGLHVVVKCNSCGRIFYDPQVAFRHGLIHDSEHSTMRQSPMTQVPSN 315
                    |.|||:           :||.||:.|.......||..:|..|              .
Human   321 --------TGEQPY-----------ECNKCGKFFMYNSKLIRHQKVHTGE--------------R 352

  Fly   316 RADFNELLLDGEMLIDNDPAFATSNQNTNPPKKEMFSSLILGSVLQCEFCEYIFADIAELLVHSA 380
            |.:.:|.   |::.:|   :|...........:..|         :|..|...|:..:.|.:|..
Human   353 RYECSEC---GKLFMD---SFTLGRHQRVHTGERPF---------ECSICGKFFSHRSTLNMHQR 402

  Fly   381 SHVAERRFECTAC----DIQMNTAKEASIHFQTDCIFMREAIRSLNVTLSRYFVCNVCELKFANT 441
            .|..:|.::|:.|    .::.|..:...||                 |..|.:.|..||..|...
Human   403 VHAGKRLYKCSECGKAFSLKHNVVQHLKIH-----------------TGERPYECTECEKAFVRK 450

  Fly   442 DLLQEHRCTSFHYFPRLNENGKKLLLPCDFCDVNFEFAHDFLAHSEEKHLNKKKREKETRNTGAG 506
            ..|.:|:        :::.:.             |....|.:.|   |.::.             
Human   451 SHLVQHQ--------KIHTDA-------------FSKRSDLIQH---KRIDI------------- 478

  Fly   507 RIRQYLCDICGKSYTQSSHLWQHLRFHQGVKPFVCQEENCDRKFTIRPDLNDHIRKCHTG----- 566
            |.|.|.|..|||::...:||..|.:.|.|.:|:.|.:  |.:.|..:..|..| .|.||.     
Human   479 RPRPYTCSECGKAFLTQAHLVGHQKIHTGERPYECTQ--CAKAFVRKSHLVQH-EKIHTDAFSKR 540

  Fly   567 ------------ERPYLCLVCGKRFLTGSVFYQHRLIHRGERRYECEECGKRFYRADALKNHQRI 619
                        .|||:|..|||.|||.:....|:.|..|||||||.||||.|..:..|..||||
Human   541 SDLIQHKRIDLRPRPYVCSECGKAFLTQAHLDGHQKIQTGERRYECNECGKFFLDSYKLVIHQRI 605

  Fly   620 HTGEKPYSCLFCTKTFRQRGDRDKH 644
            |||||||.|..|.|.||.|....:|
Human   606 HTGEKPYKCSKCGKFFRYRCTLSRH 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275368 7/19 (37%)
C2H2 Zn finger 277..297 CDD:275368 7/19 (37%)
C2H2 Zn finger 431..453 CDD:275368 6/21 (29%)
COG5048 <450..647 CDD:227381 68/212 (32%)
C2H2 Zn finger 469..490 CDD:275368 3/20 (15%)
zf-C2H2 511..533 CDD:278523 8/21 (38%)
C2H2 Zn finger 513..564 CDD:275368 16/50 (32%)
C2H2 Zn finger 541..561 CDD:275368 5/19 (26%)
zf-H2C2_2 555..581 CDD:290200 13/42 (31%)
C2H2 Zn finger 572..592 CDD:275368 8/19 (42%)
zf-H2C2_2 585..609 CDD:290200 14/23 (61%)
zf-C2H2 598..620 CDD:278523 12/21 (57%)
C2H2 Zn finger 600..620 CDD:275368 10/19 (53%)
zf-H2C2_2 612..637 CDD:290200 16/24 (67%)
C2H2 Zn finger 628..646 CDD:275368 7/17 (41%)
ZNF749NP_001018855.2 KRAB 8..62 CDD:214630
KRAB 10..47 CDD:279668
C2H2 Zn finger 202..218 CDD:275368 1/15 (7%)
C2H2 Zn finger 226..246 CDD:275368 3/23 (13%)
C2H2 Zn finger 258..274 CDD:275368 2/15 (13%)
COG5048 295..689 CDD:227381 117/441 (27%)
C2H2 Zn finger 300..320 CDD:275368 7/19 (37%)
C2H2 Zn finger 328..348 CDD:275368 7/19 (37%)
C2H2 Zn finger 356..376 CDD:275368 4/25 (16%)
zf-H2C2_2 371..393 CDD:290200 4/30 (13%)
C2H2 Zn finger 384..404 CDD:275368 5/19 (26%)
C2H2 Zn finger 412..432 CDD:275368 3/19 (16%)
zf-H2C2_2 424..449 CDD:290200 9/41 (22%)
C2H2 Zn finger 440..460 CDD:275368 6/27 (22%)
C2H2 Zn finger 485..505 CDD:275368 7/19 (37%)
C2H2 Zn finger 513..533 CDD:275368 6/22 (27%)
C2H2 Zn finger 558..578 CDD:275368 8/19 (42%)
C2H2 Zn finger 586..606 CDD:275368 10/19 (53%)
zf-H2C2_2 599..623 CDD:290200 16/23 (70%)
C2H2 Zn finger 614..634 CDD:275368 7/17 (41%)
zf-H2C2_2 627..649 CDD:290200 1/4 (25%)
C2H2 Zn finger 642..662 CDD:275368
C2H2 Zn finger 670..689 CDD:275368
C2H2 Zn finger 698..718 CDD:275368
C2H2 Zn finger 727..745 CDD:275368
C2H2 Zn finger 753..773 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.