Sequence 1: | NP_649945.1 | Gene: | topi / 41199 | FlyBaseID: | FBgn0037751 | Length: | 814 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_648109.1 | Gene: | CTCF / 38817 | FlyBaseID: | FBgn0035769 | Length: | 818 | Species: | Drosophila melanogaster |
Alignment Length: | 669 | Identity: | 140/669 - (20%) |
---|---|---|---|
Similarity: | 213/669 - (31%) | Gaps: | 219/669 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 TLAEIEVELDQQLTPDDLQPGATV-----LATNESTGGLERIVSHEELSRFFAVGPAGALPMPTD 69
Fly 70 VVVERTLADPAFKQILQEADGKKGFDPQAEQMKIRDFLAGVTSSKMTTEQSVFHGSRSNSSASTV 134
Fly 135 NRIKCPTCLVQFDAVAFQNHSCEAKPIEVAVPQQEKPHLVPTVSAP-PAPLSKPASERV----IR 194
Fly 195 ENQVRLRRYIKDEMKYDLATGIESSRKNAAKGPNECTMCDRKFVHASGLVRHMEKHALDLIPSQT 259
Fly 260 SEQPHTIPAAGLHVVVKCNSCGRIFYDPQVAF---------RHGLIHDSEHSTMRQSPMTQVPSN 315
Fly 316 RADFNELLLDGEMLIDNDPAFATSNQNT---NPPKKEMFSSLILGSVLQCEFCEYIFADIAELLV 377
Fly 378 HSA-SHVAERRFECTACDIQMNTAKEASIHFQTDCIFMREAIRSLNVTLSRYFVCNVCELKFANT 441
Fly 442 DLLQEHRCTSFHYFPRLNENGKKLLLPCDFCDVN-FEFAHDFLAHSEEKHLNKKKREKETRNTGA 505
Fly 506 GRIRQYLCDICGKSYTQSSHLWQHLRFHQGV-KP-FVCQ--EENCDRKFTIRPDLNDHIRKCHTG 566
Fly 567 ERPYLCLVCGKRFLTGSVFYQHRLIHRGERRYECEECGKRFYRADALKNHQRIHTGEKPYSCLFC 631
Fly 632 TKTFRQRGDRDKHIRARHS 650 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
topi | NP_649945.1 | C2H2 Zn finger | 230..250 | CDD:275368 | 1/19 (5%) |
C2H2 Zn finger | 277..297 | CDD:275368 | 5/28 (18%) | ||
C2H2 Zn finger | 431..453 | CDD:275368 | 3/21 (14%) | ||
COG5048 | <450..647 | CDD:227381 | 55/201 (27%) | ||
C2H2 Zn finger | 469..490 | CDD:275368 | 4/21 (19%) | ||
zf-C2H2 | 511..533 | CDD:278523 | 10/21 (48%) | ||
C2H2 Zn finger | 513..564 | CDD:275368 | 22/54 (41%) | ||
C2H2 Zn finger | 541..561 | CDD:275368 | 7/21 (33%) | ||
zf-H2C2_2 | 555..581 | CDD:290200 | 10/25 (40%) | ||
C2H2 Zn finger | 572..592 | CDD:275368 | 4/19 (21%) | ||
zf-H2C2_2 | 585..609 | CDD:290200 | 7/23 (30%) | ||
zf-C2H2 | 598..620 | CDD:278523 | 5/21 (24%) | ||
C2H2 Zn finger | 600..620 | CDD:275368 | 4/19 (21%) | ||
zf-H2C2_2 | 612..637 | CDD:290200 | 10/24 (42%) | ||
C2H2 Zn finger | 628..646 | CDD:275368 | 7/17 (41%) | ||
CTCF | NP_648109.1 | 23ISL | <116..206 | CDD:293226 | 26/163 (16%) |
C2H2 Zn finger | 296..316 | CDD:275368 | 3/19 (16%) | ||
COG5048 | 321..>621 | CDD:227381 | 83/346 (24%) | ||
zf-C2H2 | 322..344 | CDD:278523 | 3/28 (11%) | ||
C2H2 Zn finger | 324..344 | CDD:275368 | 3/26 (12%) | ||
zf-H2C2_2 | 337..361 | CDD:290200 | 10/43 (23%) | ||
C2H2 Zn finger | 352..373 | CDD:275368 | 7/20 (35%) | ||
C2H2 Zn finger | 381..401 | CDD:275368 | 7/41 (17%) | ||
zf-H2C2_2 | 394..415 | CDD:290200 | 6/46 (13%) | ||
C2H2 Zn finger | 409..429 | CDD:275368 | 3/36 (8%) | ||
zf-H2C2_2 | 422..446 | CDD:290200 | 8/43 (19%) | ||
C2H2 Zn finger | 437..457 | CDD:275368 | 9/19 (47%) | ||
C2H2 Zn finger | 467..485 | CDD:275368 | 7/21 (33%) | ||
C2H2 Zn finger | 496..516 | CDD:275370 | 4/19 (21%) | ||
C2H2 Zn finger | 524..544 | CDD:275368 | 4/19 (21%) | ||
zf-H2C2_2 | 536..561 | CDD:290200 | 10/24 (42%) | ||
C2H2 Zn finger | 552..573 | CDD:275368 | 7/20 (35%) | ||
zf-C2H2 | 587..609 | CDD:278523 | |||
C2H2 Zn finger | 589..609 | CDD:275368 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24390 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |