DRSC/TRiP Functional Genomics Resources

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Protein Alignment topi and CG10147

DIOPT Version :10

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:NP_648046.1 Gene:CG10147 / 38733 FlyBaseID:FBgn0035702 Length:448 Species:Drosophila melanogaster


Alignment Length:452 Identity:104/452 - (23%)
Similarity:171/452 - (37%) Gaps:121/452 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 KFVHASGLVRHMEKHALDLIPSQTSEQPHTIPAAGLHVVVKCNSCGRI---FYDPQVAFRH-GLI 296
            ||...:.||  ::....|::||:.                 |:.|..:   |:    :||. .:|
  Fly    32 KFSECTNLV--VDPDDQDILPSEI-----------------CSECYELLEKFH----SFRALCII 73

  Fly   297 HDSEHSTM---------RQSPMTQVPSN---RADFNELLLD-GEMLI-------DNDP------- 334
            .|::..:.         |:.|:.:|..:   ..:..||||: .||:|       .|.|       
  Fly    74 ADNKWRSKSLVTWKKIDRRKPVYEVDEDEEEELELEELLLEPPEMIICDTNLSAQNTPIVAEQAP 138

  Fly   335 ---AFATSNQNTNPP----KKEMFSSLILGSVLQCEFCEYIFADIAELLVHSASHVAERRFECT- 391
               .|.|..:|...|    ||.:....:  :..:|:.|...|.:...|::|...|.....:.|| 
  Fly   139 PTLVFHTFTENVQQPPETEKKALEEPPL--TTYKCDLCADEFREEKRLILHKKEHQGHMLYHCTE 201

  Fly   392 -ACDIQMNTAK----------EASIHF---QTDCIFMREAIRSLNVTLS---------RYFVCNV 433
             .|:...|..:          |..:.|   :..|..|.....||....|         :..:|..
  Fly   202 PGCEEAFNRFENLRQHELEHSEVGMRFVCEEEGCNRMYRHKASLKYHQSKAHDIGKPLKTHMCEF 266

  Fly   434 CELKFANTDLLQEHRCTSFHYFPRLNENGKKLLLP--CDFCDVNFEFAHDFLAHSEEK---HLNK 493
            |...|.....|.:||.|          :|.:|:||  |:..:.:..|      :|.||   |:  
  Fly   267 CGRVFKTGSALSQHRFT----------HGDQLVLPYACELPECSMRF------YSTEKLKIHM-- 313

  Fly   494 KKREKETRNTGAGRIRQYLCDICGKSYTQSSHLWQHLRFHQGVKPFVCQEENCDRKFTIRPDLND 558
                  .|:.|   |:.:.|..||...|..:.|..|:.:|...:.:.|::  |.:.......|..
  Fly   314 ------MRHQG---IKNFSCPYCGLKKTTKNELRLHINYHTLERTWSCKD--CPKVCNSSTSLKK 367

  Fly   559 HIRKCHTGERPYLCLVCGKRFLTGSVFYQHRLIHRGERRYECEECGKRFYRADALKNHQRIH 620
            |||..|...|.|.|..|.|:|.|......|.:.|.||:.:||..|||:|.:..||:.|:::|
  Fly   368 HIRAIHEKARDYACSYCEKKFATTDTRKYHEMTHTGEKNFECHVCGKKFIQPSALRTHRKVH 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275370 4/13 (31%)
C2H2 Zn finger 277..297 CDD:275370 5/23 (22%)
C2H2 Zn finger 431..453 CDD:275368 7/21 (33%)
COG5048 <450..647 CDD:227381 49/176 (28%)
C2H2 Zn finger 469..490 CDD:275368 5/23 (22%)
C2H2 Zn finger 513..564 CDD:275368 13/50 (26%)
C2H2 Zn finger 541..561 CDD:275368 4/19 (21%)
C2H2 Zn finger 572..592 CDD:275368 6/19 (32%)
C2H2 Zn finger 600..620 CDD:275368 8/19 (42%)
zf-H2C2_2 612..637 CDD:463886 4/9 (44%)
C2H2 Zn finger 628..646 CDD:275368
CG10147NP_648046.1 zf-AD 7..80 CDD:214871 14/70 (20%)
C2H2 Zn finger 171..191 CDD:275368 5/19 (26%)
C2H2 Zn finger 199..221 CDD:275368 4/21 (19%)
SFP1 <228..284 CDD:227516 13/65 (20%)
C2H2 Zn finger 230..253 CDD:275368 5/22 (23%)
C2H2 Zn finger 264..284 CDD:275368 7/29 (24%)
C2H2 Zn finger 294..316 CDD:275368 6/35 (17%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
C2H2 Zn finger 352..373 CDD:275368 6/22 (27%)
C2H2 Zn finger 381..401 CDD:275368 6/19 (32%)
C2H2 Zn finger 409..429 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.

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