DRSC/TRiP Functional Genomics Resources

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Protein Alignment topi and CG17385

DIOPT Version :10

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:NP_610962.1 Gene:CG17385 / 36603 FlyBaseID:FBgn0033934 Length:278 Species:Drosophila melanogaster


Alignment Length:262 Identity:74/262 - (28%)
Similarity:106/262 - (40%) Gaps:65/262 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   469 CDFCDVNFEFAHDFLAHSEEKHLNKKKREKETRNTGAGRIRQYLCDICGKSYTQSSHLWQHLRFH 533
            |..||..|....|...|.:|.|.:.|              ..|.|.:|.||:..|.:|.:|::.|
  Fly    18 CKRCDRTFRSKRDQTLHRQEVHNHNK--------------TTYECKLCAKSFCNSGNLDRHMKVH 68

  Fly   534 QGVKPFVCQEENCDRKFTIRPDLNDHIRKCHTGERPYLCLVCGKRFLTGSVFYQHRLIHRGERRY 598
            ..|:||||  ..|.:.|....:|..|. ..|:||||:.|..|.|.|...|...:|::.|.||:.:
  Fly    69 NDVRPFVC--NICSKAFAQAVNLQRHY-AVHSGERPFTCNFCNKSFTQQSNMKRHKMTHTGEKPF 130

  Fly   599 ECEECGKRFYRADALKNHQRIHTGEKPYSCLFCTKTFRQRGDRDKHIRARHSHLDANSRLMMQMQ 663
            .|:.||:.|.:...||.|:..|...|||.|.:|.|.|.|..:..:|:                  
  Fly   131 RCQRCGRYFSQLVNLKKHKLGHLNAKPYQCNYCEKGFTQLSNFKRHL------------------ 177

  Fly   664 KFQLETAAAQKAQSHNPEQQDNDVAGGASTSDVPSGSGFMSTEPSVAEMQYSITPEQQ----EEM 724
                        |||..|..|         .|||:     |.:.:.|..:..:..||:    |.|
  Fly   178 ------------QSHIKEGVD---------VDVPA-----SIQAAAALARERLESEQKPSFFECM 216

  Fly   725 VC 726
            ||
  Fly   217 VC 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275370
C2H2 Zn finger 277..297 CDD:275370
C2H2 Zn finger 431..453 CDD:275368
COG5048 <450..647 CDD:227381 58/177 (33%)
C2H2 Zn finger 469..490 CDD:275368 7/20 (35%)
C2H2 Zn finger 513..564 CDD:275368 17/50 (34%)
C2H2 Zn finger 541..561 CDD:275368 5/19 (26%)
C2H2 Zn finger 572..592 CDD:275368 6/19 (32%)
C2H2 Zn finger 600..620 CDD:275368 7/19 (37%)
zf-H2C2_2 612..637 CDD:463886 11/24 (46%)
C2H2 Zn finger 628..646 CDD:275368 6/17 (35%)
CG17385NP_610962.1 COG5048 <13..181 CDD:227381 60/209 (29%)
C2H2 Zn finger 18..39 CDD:275368 7/20 (35%)
C2H2 Zn finger 48..68 CDD:275368 7/19 (37%)
C2H2 Zn finger 76..96 CDD:275368 5/22 (23%)
C2H2 Zn finger 104..124 CDD:275368 6/19 (32%)
C2H2 Zn finger 132..148 CDD:275368 6/15 (40%)
C2H2 Zn finger 160..180 CDD:275368 7/49 (14%)
Blue background indicates that the domain is not in the aligned region.

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