DRSC/TRiP Functional Genomics Resources

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Protein Alignment topi and LOC3291312

DIOPT Version :10

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:XP_061509903.1 Gene:LOC3291312 / 3291312 VectorBaseID:AGAMI1_004695 Length:349 Species:Anopheles gambiae


Alignment Length:120 Identity:33/120 - (27%)
Similarity:57/120 - (47%) Gaps:13/120 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   506 GRIRQYLCDICG---KSYTQSSHLWQHLRFHQGVKPFVCQEENCDRKFTIRPDLNDHIRKCHTGE 567
            |:.:.:||.|||   |.:.      :|:..|:......|  .:|..:...:.::..||:..|...
Mosquito   231 GKRKLHLCHICGIFVKDFP------KHVINHEDDITEAC--PHCPVRMKQKTNMIAHIQTVHLKT 287

  Fly   568 RPYLCLVCGKRFLTGSVFYQHRLIHRGE-RRYECEECGKRFYRADALKNH-QRIH 620
            ....|.:|||.|:....:..|.:.|:.| ..:||:.|.|.|..::|||:| .|:|
Mosquito   288 ISKTCEICGKGFIHHKTYKYHMMSHQDEGGTFECKACSKTFTHSNALKDHFNRLH 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275370
C2H2 Zn finger 277..297 CDD:275370
C2H2 Zn finger 431..453 CDD:275368
COG5048 <450..647 CDD:227381 33/120 (28%)
C2H2 Zn finger 469..490 CDD:275368
C2H2 Zn finger 513..564 CDD:275368 11/53 (21%)
C2H2 Zn finger 541..561 CDD:275368 3/19 (16%)
C2H2 Zn finger 572..592 CDD:275368 6/19 (32%)
C2H2 Zn finger 600..620 CDD:275368 9/20 (45%)
zf-H2C2_2 612..637 CDD:463886 6/10 (60%)
C2H2 Zn finger 628..646 CDD:275368
LOC3291312XP_061509903.1 None
Blue background indicates that the domain is not in the aligned region.

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