DRSC/TRiP Functional Genomics Resources

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Protein Alignment topi and LOC3291040

DIOPT Version :10

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:XP_061496993.1 Gene:LOC3291040 / 3291040 VectorBaseID:AGAMI1_013409 Length:692 Species:Anopheles gambiae


Alignment Length:702 Identity:155/702 - (22%)
Similarity:250/702 - (35%) Gaps:208/702 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 ERIVSHEELSRFFAVGPAGALPMPTDVVVERTL------ADPAFKQILQEAD--------GKKGF 94
            ::::..::...|:       |.:.|.:.|:|:.      ..|..:.||:..:        |::..
Mosquito    54 KKVIQAKKYRDFY-------LSVQTKLFVKRSNHFLRIDRQPLVEVILRRNESPRYIYPSGRRVQ 111

  Fly    95 DPQAEQMKIRDFLAGVTSSKMTTEQSVFHGSRSNSSASTVNRIKCPTCLVQFDAVAFQNHSCEAK 159
            |...|:.:.:   |..:|...|..|   :.:..|::|| |||::.||     .:.|.....|..:
Mosquito   112 DRMREEKRTK---ARPSSESKTDPQ---NNASGNNNAS-VNRLQSPT-----TSSAIATSHCPPE 164

  Fly   160 PIEVAVPQQEKPHL--VPTVSAPPAPLSKPASERVIRENQVRLRRYIKDEMKYDLATGIESSRKN 222
            ....|||:|.....  |...|..|:|:...::........:.|.....:|:..:   |::..   
Mosquito   165 VESTAVPRQRTTSTDEVANQSHSPSPVLNFSNSNAPPPAAITLVVTTPEEVTMN---GLDDP--- 223

  Fly   223 AAKGPNECTMCDRKFVHASGLVRHMEKHALDLIPSQTSEQPHTIPAAGLHVVVKCNSCGRIFYDP 287
            |.|...|.|..|......|..:..:|..: |:   |:.:....:..:.            .||:.
Mosquito   224 AVKEDFEATEHDNNSEKESFSIEKLETES-DI---QSQDDTENVDDSA------------TFYEE 272

  Fly   288 QVAFRHGLIHDSEHSTMRQSPMTQVPSNRADFNELLLDGEMLIDNDPAFATSNQNTNPPKKEMFS 352
            |      .|:.:|                 :..|:|.|               ||...|::.|.:
Mosquito   273 Q------KIYPTE-----------------ELEEVLQD---------------QNMEDPEEHMEA 299

  Fly   353 SLILGSVLQCEFCEYIFADIAELL----VHSASHVAERRFECTACDIQMNTAKEASIHFQTDCIF 413
                         ||:  :..||.    :.|..|:.:.:::.|..::     .|||         
Mosquito   300 -------------EYL--NQHELSAGDGLDSEHHLTQEQYDSTEIEV-----LEAS--------- 335

  Fly   414 MREAIRSL---------NVTLSRYFVCNVCELKFANTDLLQEHRCTSFHYFPRLNENGKKLLLPC 469
              |||.|:         ||..:|    .....|.:..:|.                  |.||..|
Mosquito   336 --EAIESVIPGNENTGYNVQDTR----RRRRSKISGRELY------------------KSLLTEC 376

  Fly   470 DFCDVNFEFAHDFLAHSEEKHLNKKKREKETRNTGAGRIRQYLCDICG-KSYTQSSHLWQ-HLRF 532
            :.|....|      .:..|.|:|:.          :|| |.|.|.|.| .|.....|..: |:|.
Mosquito   377 NICGKMIE------RNRLEGHINRH----------SGR-RPYACHIEGCSSRFHCKHACRLHVRC 424

  Fly   533 HQGVKPFVCQEENCDRKFTIRPDLNDHIRKCHTGERPYLCLVCGKRFLTGSVFYQHRLIHRGERR 597
            ..|.:.|.|.|  |.:.:..|.||..|||:.|...| :.|.||||:|.|.|...||...|.|||.
Mosquito   425 RHGSESFTCTE--CGKVYKARRDLLGHIRETHVEPR-FQCDVCGKKFTTRSRLKQHSFYHTGERN 486

  Fly   598 YECEECGKRFYRADALKNHQRIHTGEKPYSCLFCTKTFRQRGDRDKHIRARHSHLDANSRLMMQM 662
            |.|..|..||:....||.|.|.||...||.|..|.|.||.|....:||...|.       :.:.:
Mosquito   487 YPCRVCEMRFFSNFQLKVHMRTHTKSFPYKCSVCNKRFRYRHMAKEHIVKDHG-------IDISL 544

  Fly   663 QK---FQLETAAAQKAQSHNPEQ---------------QDNDVAGGASTSDV 696
            ||   .|......::.:..|.|:               :||.:..||.::.|
Mosquito   545 QKDWVIQYPEPDPEEVEVINEEENIIQYNIQRLEETEDEDNTLGEGADSATV 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275370 4/19 (21%)
C2H2 Zn finger 277..297 CDD:275370 3/19 (16%)
C2H2 Zn finger 431..453 CDD:275368 2/21 (10%)
COG5048 <450..647 CDD:227381 68/198 (34%)
C2H2 Zn finger 469..490 CDD:275368 4/20 (20%)
C2H2 Zn finger 513..564 CDD:275368 18/52 (35%)
C2H2 Zn finger 541..561 CDD:275368 7/19 (37%)
C2H2 Zn finger 572..592 CDD:275368 10/19 (53%)
C2H2 Zn finger 600..620 CDD:275368 8/19 (42%)
zf-H2C2_2 612..637 CDD:463886 12/24 (50%)
C2H2 Zn finger 628..646 CDD:275368 7/17 (41%)
LOC3291040XP_061496993.1 None

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