DRSC/TRiP Functional Genomics Resources

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Protein Alignment topi and AgaP_AGAP004269

DIOPT Version :9

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:XP_562796.4 Gene:AgaP_AGAP004269 / 3290990 VectorBaseID:AGAP004269 Length:528 Species:Anopheles gambiae


Alignment Length:586 Identity:147/586 - (25%)
Similarity:225/586 - (38%) Gaps:126/586 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 SNSSASTVNRIKCPTC---LVQFDAVAFQNHSCE------AKPIEVAVPQQEKPHLVPTVSAPPA 182
            |....|.|::..|..|   |.||.|...|:..|:      .:..:.::|...|    .|:.|...
Mosquito    26 SEMEPSYVSKFICNGCVYKLEQFYAFRQQSLKCQEYYNGLLQYYQQSIPCSSK----TTLDATAV 86

  Fly   183 PLSKPASERVIRENQVRLR-------------------RYIKDEM-KYDLATGIESSRKNAAKGP 227
            .:..|.|...:.|...:::                   .::.||. |..|:...:...::..|..
Mosquito    87 VVQMPESVDSVFETHQQIQPDQSIHSSNELADINFSANEFMMDESEKNQLSKDYDDIIRSLQKDD 151

  Fly   228 NECTMCDRKFVHASGLVRHMEKHALDLIP---SQTSEQPHTIPAAGLHVVVKCNSCGRIFYDPQV 289
            .:.|..|.:.|..|      |.|..::|.   :.|:|:.       |....:..|..:|..|.|.
Mosquito   152 LDFTTNDDELVSLS------EAHVQEIIADVYNATAEKQ-------LQSAEELPSPQQISGDVQC 203

  Fly   290 AFRHGLIHDSEHSTMRQSPMTQVPSNRADFNELLLDGEMLIDNDPAFATSNQNTNPPKKEMFSSL 354
            :...||.....:.:|            .||:|....|         .|||:..|....|:     
Mosquito   204 SEISGLQPSDSYFSM------------VDFDESDASG---------VATSSTTTVNEAKD----- 242

  Fly   355 ILGSVLQCEFCEYIFADIAELLVHSASHVAERRFECT--ACDIQMNTAKEASIHFQTDCIFMREA 417
             |.:...||.|...|....:|.||..:|:....|:||  .|      ||........|    ...
Mosquito   243 -LPNDKTCEICFKTFRTRQKLTVHRNTHLRLAPFKCTFEGC------AKAFKSRIGLD----EHV 296

  Fly   418 IRSLNVTLSRYFVCNVCELKFANTDLLQEHRCTSFHYFPRLNENGKKLLLPCDFCDVNFEFAHDF 482
            .|..|   |..:.|::|...|.:...|..||        |.:...:.  ..|..|..:|:.....
Mosquito   297 ARHTN---SFEYTCDICSKGFQHRSYLSAHR--------RAHNTERN--FQCGLCGQSFKAKQAL 348

  Fly   483 LAHSEEKHLNKKKREKETRNTGAGRIRQYLCDICGKSYTQSSHLWQHLRFHQG-----VKPFVCQ 542
            |.| :.:||.               ::.:.|:.|.|.||::|.|..|::.|.|     :..:.|.
Mosquito   349 LDH-KNRHLG---------------VKPFACEQCDKQYTKNSLLQSHIQQHHGKRDEAITRYPCS 397

  Fly   543 EENCDRKFTIRPDLNDHIRKCHTGERPYLCLVCGKRFLTGSVFYQHRLIHRGERRYECEECGKRF 607
            |  |.::||.:..||.|:| .|..|||::|.||.|..:|......|.|.|.||:.:.||.|||.:
Mosquito   398 E--CGKQFTSKSYLNVHMR-IHRNERPFVCEVCNKGHITRKDLAVHMLSHTGEKPHTCEFCGKAY 459

  Fly   608 YRADALKNHQRIHTGEKPYSCLFCTKTFRQRGDRDKHIRARHSHLDANSRLMMQMQKFQLETAAA 672
            .|.:||..|:|.||.|:||.|..|.:||.|......| |..|...|...:|.::.|:.||.|.||
Mosquito   460 ARRNALDWHRRSHTKERPYICDICGQTFSQPTPLQVH-RKLHDTADRKKQLPIEEQQQQLATEAA 523

  Fly   673 Q 673
            |
Mosquito   524 Q 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275368 5/19 (26%)
C2H2 Zn finger 277..297 CDD:275368 6/19 (32%)
C2H2 Zn finger 431..453 CDD:275368 6/21 (29%)
COG5048 <450..647 CDD:227381 62/201 (31%)
C2H2 Zn finger 469..490 CDD:275368 5/20 (25%)
zf-C2H2 511..533 CDD:278523 8/21 (38%)
C2H2 Zn finger 513..564 CDD:275368 19/55 (35%)
C2H2 Zn finger 541..561 CDD:275368 8/19 (42%)
zf-H2C2_2 555..581 CDD:290200 12/25 (48%)
C2H2 Zn finger 572..592 CDD:275368 7/19 (37%)
zf-H2C2_2 585..609 CDD:290200 10/23 (43%)
zf-C2H2 598..620 CDD:278523 10/21 (48%)
C2H2 Zn finger 600..620 CDD:275368 10/19 (53%)
zf-H2C2_2 612..637 CDD:290200 13/24 (54%)
C2H2 Zn finger 628..646 CDD:275368 6/17 (35%)
AgaP_AGAP004269XP_562796.4 zf-AD <10..62 CDD:214871 11/35 (31%)
C2H2 Zn finger 249..269 CDD:275368 7/19 (37%)
C2H2 Zn finger 277..299 CDD:275368 6/31 (19%)
C2H2 Zn finger 307..327 CDD:275368 7/27 (26%)
C2H2 Zn finger 335..355 CDD:275368 5/20 (25%)
C2H2 Zn finger 363..383 CDD:275368 8/19 (42%)
zf-C2H2 394..416 CDD:278523 9/24 (38%)
C2H2 Zn finger 396..416 CDD:275368 9/22 (41%)
zf-H2C2_2 408..429 CDD:290200 11/21 (52%)
C2H2 Zn finger 424..444 CDD:275368 7/19 (37%)
zf-H2C2_2 436..461 CDD:290200 10/24 (42%)
C2H2 Zn finger 452..472 CDD:275368 10/19 (53%)
zf-H2C2_2 464..489 CDD:290200 13/24 (54%)
C2H2 Zn finger 480..500 CDD:275368 7/20 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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