| Sequence 1: | NP_649945.1 | Gene: | topi / 41199 | FlyBaseID: | FBgn0037751 | Length: | 814 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038952138.1 | Gene: | Zkscan4 / 291164 | RGDID: | 1309004 | Length: | 480 | Species: | Rattus norvegicus |
| Alignment Length: | 533 | Identity: | 129/533 - (24%) |
|---|---|---|---|
| Similarity: | 212/533 - (39%) | Gaps: | 130/533 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 170 KPHLVPTVSAPPAPLSKPASERVIRENQVRLRRYIKDEMKYDLATGIESSRKNAAKGPNECTMCD 234
Fly 235 RKFVHASGLVRHM--EKHALDLIPSQTS---EQPHTIPAAGLHVVVKCNSCGRIFYDPQVAFRHG 294
Fly 295 LIHDSEHSTMRQSPMTQVPSNRADFNELLLDGEMLIDNDPAFATSNQNTNPPKKEMFSSLILGSV 359
Fly 360 LQCEFCEYIFADIAELLVHS-----ASHVAERRFECTAC-----DIQMNTAKEASIH---FQTDC 411
Fly 412 IFMREAIRSLNVTLSRYFVCNVCELKFANTDLLQEHRCTSFHYFPRLNENGKKLLLPCDFCDVNF 476
Fly 477 EFAHDFLAHSEEKHLNKKKREKETRNTGAGRIRQYLCDICGKSYTQSSHLWQHLRFHQGVKPFVC 541
Fly 542 QEENCDRKFTIRPDLNDHIRKCHTGERPYLCLVCGKRFLTGSVFYQHRLIH-------------- 592
Fly 593 RGERR-------------YECEECGKRFYRADALKNHQRIHTGEKPYSCLFCTKTFRQRG----D 640
Fly 641 RDKHIRARHSHLD 653 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| topi | NP_649945.1 | C2H2 Zn finger | 230..250 | CDD:275368 | 3/21 (14%) |
| C2H2 Zn finger | 277..297 | CDD:275368 | 2/19 (11%) | ||
| C2H2 Zn finger | 431..453 | CDD:275368 | 6/21 (29%) | ||
| COG5048 | <450..647 | CDD:227381 | 67/227 (30%) | ||
| C2H2 Zn finger | 469..490 | CDD:275368 | 4/20 (20%) | ||
| zf-C2H2 | 511..533 | CDD:278523 | 10/21 (48%) | ||
| C2H2 Zn finger | 513..564 | CDD:275368 | 20/50 (40%) | ||
| C2H2 Zn finger | 541..561 | CDD:275368 | 6/19 (32%) | ||
| zf-H2C2_2 | 555..581 | CDD:290200 | 13/25 (52%) | ||
| C2H2 Zn finger | 572..592 | CDD:275368 | 7/19 (37%) | ||
| zf-H2C2_2 | 585..609 | CDD:290200 | 10/50 (20%) | ||
| zf-C2H2 | 598..620 | CDD:278523 | 8/21 (38%) | ||
| C2H2 Zn finger | 600..620 | CDD:275368 | 7/19 (37%) | ||
| zf-H2C2_2 | 612..637 | CDD:290200 | 14/24 (58%) | ||
| C2H2 Zn finger | 628..646 | CDD:275368 | 6/21 (29%) | ||
| Zkscan4 | XP_038952138.1 | SCAN | 47..156 | CDD:128708 | 25/151 (17%) |
| zf-C2H2 | 253..275 | CDD:395048 | 8/29 (28%) | ||
| C2H2 Zn finger | 255..275 | CDD:275368 | 7/27 (26%) | ||
| zf-H2C2_2 | 268..290 | CDD:404364 | 6/31 (19%) | ||
| zf-C2H2 | 281..303 | CDD:395048 | 4/22 (18%) | ||
| C2H2 Zn finger | 283..303 | CDD:275368 | 4/20 (20%) | ||
| COG5048 | <307..471 | CDD:227381 | 59/181 (33%) | ||
| C2H2 Zn finger | 311..331 | CDD:275368 | 9/19 (47%) | ||
| C2H2 Zn finger | 339..359 | CDD:275368 | 7/22 (32%) | ||
| C2H2 Zn finger | 367..387 | CDD:275368 | 7/19 (37%) | ||
| C2H2 Zn finger | 422..442 | CDD:275368 | 7/19 (37%) | ||
| C2H2 Zn finger | 450..470 | CDD:275368 | 5/19 (26%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||