DRSC/TRiP Functional Genomics Resources

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Protein Alignment topi and GLI3

DIOPT Version :10

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:NP_000159.3 Gene:GLI3 / 2737 HGNCID:4319 Length:1580 Species:Homo sapiens


Alignment Length:227 Identity:41/227 - (18%)
Similarity:72/227 - (31%) Gaps:71/227 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 EFVRMRGP---QGK-------------------GYAEMAVARVPNCGYETPLTENPIDFSEL--- 322
            |.:|:|||   .|:                   .|:..||.|.|..|....|.:.|.....|   
Human   536 EQMRLRGPSLHHGRPHLGSVPDFRFSVADGHVDAYSTSAVLRRPQKGRLAALRDEPSKVQTLNEQ 600

  Fly   323 -------AGVEQSLGKRRMSETNLAGG----TRMFPSRSIATPSHSSRGR----RWQSEADTVN- 371
                   |.|..::.:...|:.:::.|    ..:..|..:.:||..:..:    ..|.:.|.:| 
Human   601 DWERAQQASVLANVAQAFESDVDVSDGEDDRDTLLSSVDLLSPSGQADAQTLAMMLQEQLDAINK 665

  Fly   372 ---------QYPEVEGSNIDDELDEGPTNKLWSMRGFAQV--------------WHGLREKKRAE 413
                     :..|.....|:..:..|..:.|...|..:.:              ..|....:|..
Human   666 EIRLIQEEKENTEQRAEEIESRVGSGSLDNLGRFRSMSSIPPYPASSLAGSSPPGSGRSTPRRVP 730

  Fly   414 CTPLNAF--LTYVTLPWNSILNDLLSERQKRP 443
            .:|....  |..:|||     :||...|::.|
Human   731 HSPAREVDRLGVMTLP-----SDLRKHRRQLP 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275370
C2H2 Zn finger 277..297 CDD:275370 7/35 (20%)
C2H2 Zn finger 431..453 CDD:275368 4/13 (31%)
COG5048 <450..647 CDD:227381
C2H2 Zn finger 469..490 CDD:275368
C2H2 Zn finger 513..564 CDD:275368
C2H2 Zn finger 541..561 CDD:275368
C2H2 Zn finger 572..592 CDD:275368
C2H2 Zn finger 600..620 CDD:275368
zf-H2C2_2 612..637 CDD:463886
C2H2 Zn finger 628..646 CDD:275368
GLI3NP_000159.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..79
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 368..475
SFP1 <542..632 CDD:227516 16/89 (18%)
C2H2 Zn finger 548..570 CDD:275368 1/21 (5%)
C2H2 Zn finger 578..601 CDD:275368 5/22 (23%)
C2H2 Zn finger 609..630 CDD:275368 3/20 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 620..728 14/107 (13%)
Mediates interaction with DZIP1. /evidence=ECO:0000250|UniProtKB:Q61602 745..845 6/18 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 863..918
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 981..1042
Blue background indicates that the domain is not in the aligned region.

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