DRSC/TRiP Functional Genomics Resources

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Protein Alignment topi and GLI2

DIOPT Version :10

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:XP_054197371.1 Gene:GLI2 / 2736 HGNCID:4318 Length:1670 Species:Homo sapiens


Alignment Length:729 Identity:157/729 - (21%)
Similarity:241/729 - (33%) Gaps:214/729 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 ILQEADGKKGFDPQAEQMKIRDFLAGVTSSKMTTEQSVFHGSRSNSSASTVNRIKCP--TCLVQF 146
            ::..|.|....|...|.:|.|. |.|:.:.. ||....:|      ..:.|.....|  ..|:|.
Human   225 MISAARGLSPADVAQEHLKERG-LFGLPAPG-TTPSDYYH------QMTLVAGHPAPYGDLLMQS 281

  Fly   147 DAVAFQNHSCE-AKPIEVAVPQQEKPHLVPTVSAPPAPLSKPASERVIRENQVRLRRYIKDEMKY 210
            ...|...|..: ..|::|:  :...|.:.|.:|...|....|.|:.     .:.|:|.|:.... 
Human   282 GGAASAPHLHDYLNPVDVS--RFSSPRVTPRLSRKRALSISPLSDA-----SLDLQRMIRTSPN- 338

  Fly   211 DLATGIESSRKNAAKGPNECTMCDRKFVHASGLVRHMEKHALDLIPSQTSEQPHTI-PAAGLHVV 274
            .|...|.:||.::|               |||...|:...||.  |:.|.  ||.| |.|...::
Human   339 SLVAYINNSRSSSA---------------ASGSYGHLSAGALS--PAFTF--PHPINPVAYQQIL 384

  Fly   275 VKCNSCGRIFYDPQVAFRH--GLIHDSEHSTMRQSPMTQVPSNRADFNELLLDGEMLIDNDPAFA 337
            .:....|.       ||.|  .||..|. :.:.|.||. :.|..|...:|......|.|      
Human   385 SQQRGLGS-------AFGHTPPLIQPSP-TFLAQQPMA-LTSINATPTQLSSSSNCLSD------ 434

  Fly   338 TSNQNTNPPKKEMFSSLILGSVLQCEFCEYIFADIAELLVHSASHVAERRFECTACDIQMNTAKE 402
             :|||....:..:.|:                  :..:.:|..|.|...............|..:
Human   435 -TNQNKQSSESAVSST------------------VNPVAIHKRSKVKTEPEGLRPASPLALTQGQ 480

  Fly   403 ASIHFQTDCI--FMREAIRSLNVTLSRYFVCNVCELKFANTDLLQEHRC----TSFHYFPRLNEN 461
            .|.|....|.  ..:|.:..|...|.|             .|..||...    |:.|:       
Human   481 VSGHGSCGCALPLSQEQLADLKEDLDR-------------DDCKQEAEVVIYETNCHW------- 525

  Fly   462 GKKLLLPCDFCDVNFEFAHDFLAHSEEKHLNKKKREKETRNTGAGRIRQYLC--DIC---GKSYT 521
                    :.|...::.....:.|...:|::.:|:|             ::|  ..|   .|.:.
Human   526 --------EDCTKEYDTQEQLVHHINNEHIHGEKKE-------------FVCRWQACTREQKPFK 569

  Fly   522 QSSHLWQHLRFHQGVKPFVCQEENCDRKFTIRPDLNDHIRKCHTGERPYLCLVCGKRFLTGSVFY 586
            ....|..|:|.|.|.||..|..|.|.:.::...:|..|:|. ||||:||:|              
Human   570 AQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHLRS-HTGEKPYVC-------------- 619

  Fly   587 QHRLIHRGERRYECEECGKRFYRA-DALKNHQRIHTGEKPYSCLF--CTKTFRQRGDRDKHIRAR 648
                        |.|.|.|.|..| |..|:..|.|:.||||.|..  |||.:.......||::..
Human   620 ------------EHEGCNKAFSNASDRAKHQNRTHSNEKPYICKIPGCTKRYTDPSSLRKHVKTV 672

  Fly   649 HSHLDANSRLMMQMQKFQLETAAAQKAQSHNPEQQDNDVAGGASTSDVP----SGSGFMSTEPSV 709
            |.                        ..:|..::|.|||     ....|    :|.....|||..
Human   673 HG------------------------PDAHVTKKQRNDV-----HLRTPLLKENGDSEAGTEPGG 708

  Fly   710 AE-MQYSITPEQQEEMVCVPIDEVNNSFFMSHYMQAVPMEEDGSGQHIIVFEQPGQNMDMMSIYD 773
            .| .:.|.|.:..|:  |:             :::|:..|..|..|     ..||......|  :
Human   709 PESTEASSTSQAVED--CL-------------HVRAIKTESSGLCQ-----SSPGAQSSCSS--E 751

  Fly   774 QQQVGE-PMHESGV 786
            ...:|. |.::|||
Human   752 PSPLGSAPNNDSGV 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275370 4/19 (21%)
C2H2 Zn finger 277..297 CDD:275370 5/21 (24%)
C2H2 Zn finger 431..453 CDD:275368 4/25 (16%)
COG5048 <450..647 CDD:227381 50/204 (25%)
C2H2 Zn finger 469..490 CDD:275368 2/20 (10%)
C2H2 Zn finger 513..564 CDD:275368 16/55 (29%)
C2H2 Zn finger 541..561 CDD:275368 5/19 (26%)
C2H2 Zn finger 572..592 CDD:275368 1/19 (5%)
C2H2 Zn finger 600..620 CDD:275368 8/20 (40%)
zf-H2C2_2 612..637 CDD:463886 11/26 (42%)
C2H2 Zn finger 628..646 CDD:275368 6/19 (32%)
GLI2XP_054197371.1 PRK12323 <19..166 CDD:481241
SFP1 <583..673 CDD:227516 36/116 (31%)
C2H2 Zn finger 589..611 CDD:275368 6/22 (27%)
C2H2 Zn finger 619..642 CDD:275368 10/48 (21%)
C2H2 Zn finger 650..671 CDD:275368 6/20 (30%)
PHA03247 <996..1473 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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