DRSC/TRiP Functional Genomics Resources

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Protein Alignment topi and EGR3

DIOPT Version :10

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:XP_005273482.1 Gene:EGR3 / 1960 HGNCID:3240 Length:442 Species:Homo sapiens


Alignment Length:88 Identity:33/88 - (37%)
Similarity:49/88 - (55%) Gaps:1/88 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   537 KPFVCQEENCDRKFTIRPDLNDHIRKCHTGERPYLCLVCGKRFLTGSVFYQHRLIHRGERRYECE 601
            :|..|..|.|||:|:...:|..|:| .|||.:|:.|.:|.:.|........|...|.||:.:.||
Human   328 RPHACPAEGCDRRFSRSDELTRHLR-IHTGHKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFACE 391

  Fly   602 ECGKRFYRADALKNHQRIHTGEK 624
            .||::|.|:|..|.|.:||..:|
Human   392 FCGRKFARSDERKRHAKIHLKQK 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275370
C2H2 Zn finger 277..297 CDD:275370
C2H2 Zn finger 431..453 CDD:275368
COG5048 <450..647 CDD:227381 33/88 (38%)
C2H2 Zn finger 469..490 CDD:275368
C2H2 Zn finger 513..564 CDD:275368 10/26 (38%)
C2H2 Zn finger 541..561 CDD:275368 8/19 (42%)
C2H2 Zn finger 572..592 CDD:275368 4/19 (21%)
C2H2 Zn finger 600..620 CDD:275368 9/19 (47%)
zf-H2C2_2 612..637 CDD:463886 5/13 (38%)
C2H2 Zn finger 628..646 CDD:275368
EGR3XP_005273482.1 DUF3446 142..228 CDD:463400
SFP1 <254..408 CDD:227516 30/80 (38%)
C2H2 Zn finger 332..354 CDD:275368 9/22 (41%)
COG5048 358..>431 CDD:227381 20/57 (35%)
C2H2 Zn finger 362..382 CDD:275368 4/19 (21%)
C2H2 Zn finger 390..410 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.

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