DRSC/TRiP Functional Genomics Resources

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Protein Alignment topi and LOC1278927

DIOPT Version :10

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:XP_061512762.1 Gene:LOC1278927 / 1278927 VectorBaseID:AGAMI1_009459 Length:1163 Species:Anopheles gambiae


Alignment Length:674 Identity:160/674 - (23%)
Similarity:236/674 - (35%) Gaps:183/674 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 HSCEAKPIEVAVPQQEKP----HLVPTVSAPPAPLSK------------PASERVIRENQVRLRR 202
            |....:||.:..|:.:.|    ||: .|..|...|.|            |.:..:::.|...|.:
Mosquito    28 HPPPPQPIPIVKPEFKVPPIPAHLM-DVRGPDGSLVKINMPEHHDPSKPPNNVEMLKVNIEDLSQ 91

  Fly   203 YIK-----DEMKYDLATG-----IESSRKNAA-------------------KGPNECTMCDRKFV 238
            ::.     .::..|:.||     :.||..|.|                   :.|.:|:.|.:.|.
Mosquito    92 FLSYHEVFGKLPSDMLTGPSASLVPSSSTNTATTSAHSNGKLNHIRPGPTGESPFKCSYCAKSFT 156

  Fly   239 HASGLVRHMEKHALDLIPSQTSEQPHTIPAAG--------------LH---VVVKCNSCGRIFYD 286
            ....|..|:.:|        |.|.|:..|..|              ||   ...:|..||:.|..
Mosquito   157 RKEHLTNHVRQH--------TGESPYRCPYCGKTFTRKEHLTNHVRLHTGETPYQCTYCGKKFTR 213

  Fly   287 PQVAFRHGLIHD----------------SEHSTMRQSPMTQVPSNRADF-----------NELLL 324
            .:....|..:|.                .||.|..    |::.:....|           .|.|.
Mosquito   214 KEHLTNHVRLHTGETPFQCTYCEKKFTRKEHLTNH----TRLHTGETPFQCSYCQKKFTRKEHLT 274

  Fly   325 DGEMLIDNDPAFATSNQNTNPPKKEMFS---SLILGSV-LQCEFCEYIFADIAELLVHSASHVAE 385
            :...|...:..|..|.......:||..:   .|..|.. .||.:|:..|.....|..|...|..|
Mosquito   275 NHVRLHTGETPFQCSYCQKKFTRKEHLTYHVRLHTGETPFQCSYCQKKFTRKEHLTNHVRLHTGE 339

  Fly   386 RRFECTACDIQMNTAKEASIHFQ----------TDC--IFMREAIRSLNV---TLSRYFVCNVCE 435
            ..::||.||.:....:..:.|.:          |.|  .|.|:...:.::   |....:.|..||
Mosquito   340 TPYQCTYCDKKFTRKEHLTNHVRIHTGETPYRCTYCEKKFTRKERLTYHIRWHTGETPYHCTYCE 404

  Fly   436 LKFANTDLLQEH----------RCTSFHYFPRLNENGKKLLL-----------PCDFCDVNFEFA 479
            .|||..:.|..|          :||   |..:.....::|.:           .|.:||..|...
Mosquito   405 KKFARKEHLTNHVRLHTGETPYQCT---YCEKKFSRRERLTIHTRIHTGETPYACTYCDKKFSRK 466

  Fly   480 HDFLAH--------------SEEKHLNKKKREKETR-NTGAGRIRQYLCDICGKSYTQSSHLWQH 529
            .....|              .|:|...|:......| :||.   ..|.|..|.|.:|:..||..|
Mosquito   467 ERLTYHIRLHTGETPYQCTYCEKKFTRKEHLTNHVRLHTGE---TPYPCTYCEKKFTRKEHLTNH 528

  Fly   530 LRFHQGVKPFVCQEENCDRKFTIRPDLNDHIRKCHTGERPYLCLVCGKRFLTGSVFYQHRLIHRG 594
            :|.|.|..|:.|  ..||:|||.:..|.:|.| .||||.||.|..|.|:|:.......|..:|.|
Mosquito   529 VRLHTGETPYQC--TYCDKKFTRKEHLTNHTR-LHTGETPYHCTYCEKKFMRKEHLKNHIRLHTG 590

  Fly   595 ERRYECEECGKRFYRADALKNHQRIHTGEKPYSCLFCTKTFRQRGDRDKHIR------------- 646
            |..|:|..|.|:|.|.:.|.||.|:||||.||.|.:|.|.|.::.....|:|             
Mosquito   591 ETPYQCTYCQKKFTRKEHLTNHTRLHTGETPYQCSYCQKKFTRKEHLTNHVRLHTGETPYTCTYC 655

  Fly   647 ----ARHSHLDANSRLMMQMQKFQ 666
                .|..||..:.||......||
Mosquito   656 QKKFTRKEHLTNHVRLHTGETPFQ 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275370 5/19 (26%)
C2H2 Zn finger 277..297 CDD:275370 5/19 (26%)
C2H2 Zn finger 431..453 CDD:275368 10/31 (32%)
COG5048 <450..647 CDD:227381 71/239 (30%)
C2H2 Zn finger 469..490 CDD:275368 6/34 (18%)
C2H2 Zn finger 513..564 CDD:275368 20/50 (40%)
C2H2 Zn finger 541..561 CDD:275368 8/19 (42%)
C2H2 Zn finger 572..592 CDD:275368 5/19 (26%)
C2H2 Zn finger 600..620 CDD:275368 9/19 (47%)
zf-H2C2_2 612..637 CDD:463886 14/24 (58%)
C2H2 Zn finger 628..646 CDD:275368 5/17 (29%)
LOC1278927XP_061512762.1 None

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