DRSC/TRiP Functional Genomics Resources

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Protein Alignment topi and LOC1272099

DIOPT Version :10

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:XP_061500601.1 Gene:LOC1272099 / 1272099 VectorBaseID:AGAMI1_010102 Length:341 Species:Anopheles gambiae


Alignment Length:354 Identity:94/354 - (26%)
Similarity:132/354 - (37%) Gaps:94/354 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   378 HSASHVAERRFECTACD----IQMNTAKEASIHFQTDCIFMREAIRSLNVTLSRYFVCNVCEL-- 436
            ||.|.|.  || |...|    |.::...:.|:..|...:|  ..|::||.....|.||..|:.  
Mosquito     6 HSLSTVC--RF-CLCRDEDKLIPLSILTDKSLTLQDMELF--TGIQNLNDHPYLYMVCEECDSTV 65

  Fly   437 -KF-------ANTDLLQEHRCTSFHYFPR-----LNENGKKLLLPCDFCDV-NFEFAHDFLAHSE 487
             ||       |.||          .||.:     |.||.:....|.:...| ..:..|:.|..||
Mosquito    66 NKFVAFRALCAKTD----------DYFRKLVTEALAENDETQAPPNETAIVGETKVQHNQLEESE 120

  Fly   488 EKHLNKKKREKETRNTGAGRIRQYLCDICGKSYTQSSHLWQHLRFHQGVKPFVCQE--------- 543
            ... :.:...||.:.|.|....:.||||||....:   |..|.|.|....|:.|..         
Mosquito   121 TVS-SLRAAAKEGKQTVAEDASKKLCDICGAFVAE---LNGHRRVHTKEAPYACDYCSIRMTHKS 181

  Fly   544 ------------------ENCDRKFTIRPDLNDHIRKCHTGERPYLCLVCGKRFLTGSVFYQHRL 590
                              |.||:.||.......|:|..|:.|:.|.|..|.|:|...|..:.|.:
Mosquito   182 NLLRHIDSVHLKRIIKRCEQCDKGFTSYFSYGSHMRSHHSTEKKYECKTCCKKFNHHSSLWLHNI 246

  Fly   591 -IHRGERRYECEECGKRFYRADALKNHQRIHTGEKPY---------------------------S 627
             .|:.||:|:|..||..:...::|:.|:|.|:.|:||                           |
Mosquito   247 RTHQDERKYKCTTCGLPWKTKESLRTHERSHSSEQPYACQHCPKRFKTRYGWKSHELTHTGIVFS 311

  Fly   628 CLFCTKTFRQRGDRDKHIRARHSHLDANS 656
            |..|.||||.:...:.|||..|....|.|
Mosquito   312 CQLCDKTFRYKTLINAHIRKAHPEATATS 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275370
C2H2 Zn finger 277..297 CDD:275370
C2H2 Zn finger 431..453 CDD:275368 7/31 (23%)
COG5048 <450..647 CDD:227381 66/257 (26%)
C2H2 Zn finger 469..490 CDD:275368 5/21 (24%)
C2H2 Zn finger 513..564 CDD:275368 18/77 (23%)
C2H2 Zn finger 541..561 CDD:275368 7/46 (15%)
C2H2 Zn finger 572..592 CDD:275368 6/20 (30%)
C2H2 Zn finger 600..620 CDD:275368 6/19 (32%)
zf-H2C2_2 612..637 CDD:463886 13/51 (25%)
C2H2 Zn finger 628..646 CDD:275368 7/17 (41%)
LOC1272099XP_061500601.1 None
Blue background indicates that the domain is not in the aligned region.

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