DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment topi and AgaP_AGAP011262

DIOPT Version :9

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:XP_309377.4 Gene:AgaP_AGAP011262 / 1270661 VectorBaseID:AGAP011262 Length:687 Species:Anopheles gambiae


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275368
C2H2 Zn finger 277..297 CDD:275368
C2H2 Zn finger 431..453 CDD:275368
COG5048 <450..647 CDD:227381
C2H2 Zn finger 469..490 CDD:275368
zf-C2H2 511..533 CDD:278523
C2H2 Zn finger 513..564 CDD:275368
C2H2 Zn finger 541..561 CDD:275368
zf-H2C2_2 555..581 CDD:290200
C2H2 Zn finger 572..592 CDD:275368
zf-H2C2_2 585..609 CDD:290200
zf-C2H2 598..620 CDD:278523
C2H2 Zn finger 600..620 CDD:275368
zf-H2C2_2 612..637 CDD:290200
C2H2 Zn finger 628..646 CDD:275368
AgaP_AGAP011262XP_309377.4 C2H2 Zn finger 3..23 CDD:275368
COG5048 25..478 CDD:227381
C2H2 Zn finger 31..51 CDD:275368
C2H2 Zn finger 59..79 CDD:275368
C2H2 Zn finger 87..107 CDD:275368
C2H2 Zn finger 115..135 CDD:275368
COG5048 297..682 CDD:227381
C2H2 Zn finger 318..338 CDD:275368
C2H2 Zn finger 388..408 CDD:275368
C2H2 Zn finger 417..437 CDD:275368
C2H2 Zn finger 445..465 CDD:275368
C2H2 Zn finger 473..493 CDD:275368
C2H2 Zn finger 501..521 CDD:275368
C2H2 Zn finger 529..545 CDD:275368
C2H2 Zn finger 554..574 CDD:275368
C2H2 Zn finger 582..602 CDD:275368
C2H2 Zn finger 610..630 CDD:275368
C2H2 Zn finger 638..658 CDD:275368
C2H2 Zn finger 666..686 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.