DRSC/TRiP Functional Genomics Resources

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Protein Alignment topi and LOC1269320

DIOPT Version :10

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:XP_307943.5 Gene:LOC1269320 / 1269320 VectorBaseID:AGAMI1_000406 Length:473 Species:Anopheles gambiae


Alignment Length:517 Identity:120/517 - (23%)
Similarity:197/517 - (38%) Gaps:129/517 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 ECTMCDRKFVHASGLVRHMEKHALDLIPSQTS------------EQPHTIPAAGLHVVVKCNSCG 281
            ||.:|        |.:|.|.:|.|..:.::.|            |:..:..|..|.....|..|.
Mosquito     9 ECGIC--------GNIRPMVQHNLQKVKTKFSSTTVVQLLERFFERELSDRAIELEQSGVCKECY 65

  Fly   282 RIFYDPQVAFRHGLIHDSEHSTMRQSPMTQVPSNRADFNELLLDGEMLIDNDPAFATSNQ----- 341
            ....|...|:...||...|.:.:.|:      ||...|.||.:..    |:|.......|     
Mosquito    66 TKLNDYDAAYTKALIIQQELTDLLQN------SNLRLFEELHVQS----DDDEKVKVDEQHGEIK 120

  Fly   342 -----------NTNPPKKEMFSSLILGSV---LQCEFCEYIFADIAELLVHSASHVAERRFECTA 392
                       :.||..: |.|...|.::   ::|..|...|.::.:..:|:...|:|.      
Mosquito   121 WEQSGEVEQSGDANPTAR-MLSVDALPTIRICMECAVCGETFNNLQDADLHTHDEVSEE------ 178

  Fly   393 CDIQMNTAKEASIHFQTDCIFMREAIRSLNVTL-----------SRYFVCNVCELKFANTDLLQE 446
               :....||:|   .:..:.:.|.|.:.::..           ...:..:.|...:..|::..|
Mosquito   179 ---EQPPFKESS---NSSPMLVIETIGTEHIHADAAPEESDEPGDSMYTEDGCVQPYYKTEMKDE 237

  Fly   447 HRCTSFHYFPRLNENGKKLLLPCDFCDVNFEFAHDFLAHSEEKH-LNKKKREKETRNTGAGRIRQ 510
            .....   ..|..:|.:   :.|.:|:..||.......|.:..| ::.:|.              
Mosquito   238 EEAGD---ETRPEQNRR---MACFYCEATFEDKVSLKEHFKTSHPIDLEKN-------------- 282

  Fly   511 YLCDICGKSY----TQSSHLWQHLRFHQGVKPFVCQEENCDRKFTIRPDLNDHIRKCHTGERPYL 571
             :|.:||.:.    ..:|||.:|:|..|    ..|..  |.:|||.:..|..|: ..||||:.|.
Mosquito   283 -ICKVCGLTMKTRAALASHLGKHVRESQ----LTCSV--CSKKFTQKTSLQRHM-AIHTGEKAYQ 339

  Fly   572 CLVCGKRFLTGSVFYQHRLIHRGERRYECEECGKRFYRADALKNHQRIHTGEKPYSCLFCTKTFR 636
            |..|||:::..|.||.|:|.|:..|..:|..||..|.....||.|.|.|:||||:.|..|.:.|.
Mosquito   340 CDQCGKQYIHYSSFYMHQLAHKDVRAKKCTICGNSFTSNSHLKRHMRTHSGEKPFDCPVCGQKFS 404

  Fly   637 QRGDRDKHIRARHS-------------HLDANS----RLMMQMQKFQLETAAA-----QKAQ 676
            ||.:..:|:.| ||             |.|..|    :|...::|:..:.||:     |||:
Mosquito   405 QRYNMVQHLNA-HSGKAKRSVKMLKCPHCDQCSDRYTQLKKHLEKYHPDNAASTLESMQKAK 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275370 5/19 (26%)
C2H2 Zn finger 277..297 CDD:275370 5/19 (26%)
C2H2 Zn finger 431..453 CDD:275368 3/21 (14%)
COG5048 <450..647 CDD:227381 60/201 (30%)
C2H2 Zn finger 469..490 CDD:275368 5/20 (25%)
C2H2 Zn finger 513..564 CDD:275368 16/54 (30%)
C2H2 Zn finger 541..561 CDD:275368 7/19 (37%)
C2H2 Zn finger 572..592 CDD:275368 9/19 (47%)
C2H2 Zn finger 600..620 CDD:275368 8/19 (42%)
zf-H2C2_2 612..637 CDD:463886 12/24 (50%)
C2H2 Zn finger 628..646 CDD:275368 6/17 (35%)
LOC1269320XP_307943.5 None

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