DRSC/TRiP Functional Genomics Resources

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Protein Alignment topi and AgaP_AGAP012741

DIOPT Version :9

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:XP_306506.3 Gene:AgaP_AGAP012741 / 1267949 VectorBaseID:AGAP012741 Length:390 Species:Anopheles gambiae


Alignment Length:460 Identity:100/460 - (21%)
Similarity:163/460 - (35%) Gaps:117/460 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 LVRHMEKHALDLIPSQTSEQPHTIPAAGLHVVVKCNSC----GRIFYDPQVAFRHGLIHDSE--- 300
            |.||:   :|.::|..               |::|..|    |.:  .....||:..|.:.|   
Mosquito     1 LHRHL---SLQILPDD---------------VLRCAICFECLGSL--KKSTDFRYACIRNDETFR 45

  Fly   301 ------HSTMRQSP--MTQVPSNRADFNELLLDGEMLIDNDPAFATSNQNT------NPPKKEMF 351
                  .|..::.|  :...|....|.:.|.|..:||||........:::|      |...:|..
Mosquito    46 RLCVGPSSVGKKEPVKLGHNPMVHPDADPLELKFDMLIDEVVETKLYDEDTSIQIIANQDARETV 110

  Fly   352 SSLILGSVLQCEFCEYIFADIAELLVHSASHVAE-----------------------RRFECTAC 393
            |            ||    ::||...::|.:.|.                       ||.:....
Mosquito   111 S------------CE----EVAEAEEYNAPYSANYIELGEPFSDDTDTDEPKRKGKPRRRKADLN 159

  Fly   394 DIQMNTAKEASIHFQTDCIFMREAIRSLNVTLSRY--FVCNVCELKFANTDLLQEHRCTSFHYFP 456
            ..:.:..|:.|   :|..|...|:..||.....::  .:|.||.:...|.|             .
Mosquito   160 GTRSDATKQPS---RTPTILENESDPSLKPKAPKHKKVLCYVCGIWITNID-------------G 208

  Fly   457 RLNENGKKLLLPCDFCDVNFEFAHDFLAHSEEKHLNKKKREKETRNTGAGRIRQYLCDICGKSYT 521
            .:..:.|:....|..|.|              |.:||....:..:.....||..| |::|||.:|
Mosquito   209 HIASHNKQANFACPHCPV--------------KMINKCNLMRHVKQVHEKRIIMY-CELCGKGFT 258

  Fly   522 QSSHLWQHLRFHQGVKPFVCQEENCDRKFTIRPDLNDHIRKCHTGERPYLCLVCGKRFLTGSVFY 586
            ..::...|:..|...:.:.|..  |..||..:..|.:|.|..|..| .:.|..||..|.|.....
Mosquito   259 HKNNYVSHMVSHNIGRTYDCSV--CFVKFRHQGALRNHFRSVHLNE-TFPCATCGMVFRTPERLK 320

  Fly   587 QHRLIHRGERRYECEECGKRFYRADALKNHQRIHTGEKPYSCLFCTKTFRQRGDRDKHIRARHSH 651
            :|:.:|..|:.|.|.:|.|||....|...|:..||| ..:.|..|.|::|.:.....|.|..|..
Mosquito   321 RHQPVHSTEQPYVCRQCPKRFKYRYARTIHEITHTG-VIFRCRHCDKSYRYKAQLKVHQRKTHPD 384

  Fly   652 LDANS 656
            .:::|
Mosquito   385 SESDS 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275368 3/6 (50%)
C2H2 Zn finger 277..297 CDD:275368 5/23 (22%)
C2H2 Zn finger 431..453 CDD:275368 5/21 (24%)
COG5048 <450..647 CDD:227381 50/196 (26%)
C2H2 Zn finger 469..490 CDD:275368 3/20 (15%)
zf-C2H2 511..533 CDD:278523 7/21 (33%)
C2H2 Zn finger 513..564 CDD:275368 14/50 (28%)
C2H2 Zn finger 541..561 CDD:275368 6/19 (32%)
zf-H2C2_2 555..581 CDD:290200 9/25 (36%)
C2H2 Zn finger 572..592 CDD:275368 6/19 (32%)
zf-H2C2_2 585..609 CDD:290200 9/23 (39%)
zf-C2H2 598..620 CDD:278523 8/21 (38%)
C2H2 Zn finger 600..620 CDD:275368 7/19 (37%)
zf-H2C2_2 612..637 CDD:290200 8/24 (33%)
C2H2 Zn finger 628..646 CDD:275368 5/17 (29%)
AgaP_AGAP012741XP_306506.3 zf-AD <1..46 CDD:214871 13/64 (20%)
C2H2 Zn finger 196..213 CDD:275368 5/29 (17%)
C2H2 Zn finger 221..242 CDD:275368 6/34 (18%)
C2H2 Zn finger 250..270 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 6/19 (32%)
C2H2 Zn finger 334..354 CDD:275368 7/19 (37%)
C2H2 Zn finger 361..382 CDD:275368 6/20 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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