DRSC/TRiP Functional Genomics Resources

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Protein Alignment topi and LOC101733761

DIOPT Version :9

Sequence 1:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster
Sequence 2:XP_017946107.2 Gene:LOC101733761 / 101733761 -ID:- Length:417 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275368
C2H2 Zn finger 277..297 CDD:275368
C2H2 Zn finger 431..453 CDD:275368
COG5048 <450..647 CDD:227381
C2H2 Zn finger 469..490 CDD:275368
zf-C2H2 511..533 CDD:278523
C2H2 Zn finger 513..564 CDD:275368
C2H2 Zn finger 541..561 CDD:275368
zf-H2C2_2 555..581 CDD:290200
C2H2 Zn finger 572..592 CDD:275368
zf-H2C2_2 585..609 CDD:290200
zf-C2H2 598..620 CDD:278523
C2H2 Zn finger 600..620 CDD:275368
zf-H2C2_2 612..637 CDD:290200
C2H2 Zn finger 628..646 CDD:275368
LOC101733761XP_017946107.2 KRAB_A-box 9..68 CDD:413388
C2H2 Zn finger 280..300 CDD:275368
zf-C2H2 280..300 CDD:395048
SFP1 <302..385 CDD:227516
C2H2 Zn finger 308..328 CDD:275368
C2H2 Zn finger 336..356 CDD:275368
C2H2 Zn finger 364..384 CDD:275368
zf-H2C2_2 376..401 CDD:404364
C2H2 Zn finger 392..412 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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