Sequence 1: | NP_649945.1 | Gene: | topi / 41199 | FlyBaseID: | FBgn0037751 | Length: | 814 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017952890.2 | Gene: | LOC101731242 / 101731242 | -ID: | - | Length: | 696 | Species: | Xenopus tropicalis |
Alignment Length: | 748 | Identity: | 167/748 - (22%) |
---|---|---|---|
Similarity: | 252/748 - (33%) | Gaps: | 256/748 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 VSGEYTLAEIEVELDQQLTPDDLQPGATVLATNESTGGLERIVSHEELSRFFAVGPAGALPMPTD 69
Fly 70 VVVERTLADPAFKQILQEADGKKGFDPQAEQMKIRDFLAGVTSSKMTTEQSVFHGSRSNSSASTV 134
Fly 135 NRIKCPTCLVQFDAVAFQNHSCEAKPIEVAVPQQEKPHLVPTVSAPPAPLSKPASERVIRENQVR 199
Fly 200 LRRYIKDEMKYDLATGIESSRKNAAKGPNECTMCDRKFVHASGLVRHMEKHALDLIPSQTSEQPH 264
Fly 265 TIPAAGLHVVVKCNSCGRIF---YDPQVAFR-HG-------------------LIHD-------S 299
Fly 300 EHSTMRQSPMTQVPS-------------------------------NRAD--FNELLLDGEMLID 331
Fly 332 ND---PAFATS---------------NQNTN----PPKKEMFSSLILGSVLQCEFCEYIFADIAE 374
Fly 375 LLVHSASHVAERRFECTACDIQMNTAKEASIH----------FQTDC--IFMREAIRSLNV---T 424
Fly 425 LSRYFVCNVCELKFANTDLLQEHRCTSFHYFPRLNENGKKLLLPCDFCDVNFEFAHDFLAHSEEK 489
Fly 490 HLNKKKREKETRNTGAGRIRQYLCDICGKSYTQSSHLWQHLRFHQGVKPFVCQEENCDRKFTIRP 554
Fly 555 DLNDHIRKCHTGERPYLCLVCGKRFLTGSVFYQHRLIHRGERRYECEECGKRFYRADALKNHQRI 619
Fly 620 HTGEKPYSCLFCTKTFRQRGDRDKHIRARHSHL 652 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
topi | NP_649945.1 | C2H2 Zn finger | 230..250 | CDD:275368 | 5/19 (26%) |
C2H2 Zn finger | 277..297 | CDD:275368 | 7/42 (17%) | ||
C2H2 Zn finger | 431..453 | CDD:275368 | 5/21 (24%) | ||
COG5048 | <450..647 | CDD:227381 | 68/196 (35%) | ||
C2H2 Zn finger | 469..490 | CDD:275368 | 6/20 (30%) | ||
zf-C2H2 | 511..533 | CDD:278523 | 6/21 (29%) | ||
C2H2 Zn finger | 513..564 | CDD:275368 | 19/50 (38%) | ||
C2H2 Zn finger | 541..561 | CDD:275368 | 8/19 (42%) | ||
zf-H2C2_2 | 555..581 | CDD:290200 | 13/25 (52%) | ||
C2H2 Zn finger | 572..592 | CDD:275368 | 8/19 (42%) | ||
zf-H2C2_2 | 585..609 | CDD:290200 | 12/23 (52%) | ||
zf-C2H2 | 598..620 | CDD:278523 | 9/21 (43%) | ||
C2H2 Zn finger | 600..620 | CDD:275368 | 9/19 (47%) | ||
zf-H2C2_2 | 612..637 | CDD:290200 | 13/24 (54%) | ||
C2H2 Zn finger | 628..646 | CDD:275368 | 7/17 (41%) | ||
LOC101731242 | XP_017952890.2 | KRAB_A-box | 64..>93 | CDD:413388 | |
COG5048 | 233..636 | CDD:227381 | 99/461 (21%) | ||
C2H2 Zn finger | 236..256 | CDD:275368 | 5/19 (26%) | ||
C2H2 Zn finger | 264..284 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 424..443 | CDD:275368 | 4/18 (22%) | ||
C2H2 Zn finger | 451..471 | CDD:275368 | 3/19 (16%) | ||
C2H2 Zn finger | 479..499 | CDD:275368 | 5/19 (26%) | ||
C2H2 Zn finger | 507..527 | CDD:275368 | 5/28 (18%) | ||
C2H2 Zn finger | 535..555 | CDD:275368 | 6/31 (19%) | ||
C2H2 Zn finger | 563..583 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 591..611 | CDD:275368 | 9/22 (41%) | ||
C2H2 Zn finger | 619..639 | CDD:275368 | 8/19 (42%) | ||
zf-H2C2_2 | 635..656 | CDD:404364 | 12/20 (60%) | ||
C2H2 Zn finger | 647..667 | CDD:275368 | 9/19 (47%) | ||
zf-H2C2_2 | 659..684 | CDD:404364 | 13/24 (54%) | ||
C2H2 Zn finger | 675..695 | CDD:275368 | 8/22 (36%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |