DRSC/TRiP Functional Genomics Resources

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Protein Alignment Whamy and Wasl

DIOPT Version :9

Sequence 1:NP_001036699.1 Gene:Whamy / 41198 FlyBaseID:FBgn0037750 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_038964277.1 Gene:Wasl / 682507 RGDID:735144 Length:507 Species:Rattus norvegicus


Alignment Length:559 Identity:139/559 - (24%)
Similarity:180/559 - (32%) Gaps:239/559 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 FFSFQPPSMQVSSDVFAHPPPAVRPPPHYADNVSINASLDGMKSSSSSNSLDRYLGAP--PSVAL 171
            |.:|...:.||:.: ||:...|.:......|       |.|.:...|....|    ||  |::.:
  Rat   104 FHTFAGDTCQVALN-FANEEEAKKFRKAVTD-------LLGRRQRKSEKRRD----APNGPNLPM 156

  Fly   172 A-----GPSFATSVLVSS------------KG-------SKYEISGPVNFQHVSGDVTRDRTRNA 212
            |     .|...|:....|            ||       :|.:|..|.||||: |.|..| ....
  Rat   157 ATVDIKNPEITTNRFYGSQVNNISHTKEKKKGKAKKKRLTKADIGTPSNFQHI-GHVGWD-PNTG 219

  Fly   213 FDL-NADPNDKVLRKYMMERGITEADISDMRRQEVIKKIIHSNFTWMPPKSDLQAQPKVQDHARP 276
            ||| |.||.   |:......||:||.:.|....:||...|.........|::|:.|...|..|.|
  Rat   220 FDLNNLDPE---LKNLFDMCGISEAQLKDRETSKVIYDFIEKTGGVEAVKNELRRQGPPQWSAPP 281

  Fly   277 LLYATISTNNQITPPPS---PPPPPIATISRPTEAPNFSNYASLTSRFVDISDMDLPAPTPAAPT 338
                        .||||   |||||                               |.|..:.| 
  Rat   282 ------------PPPPSRGGPPPPP-------------------------------PPPHSSGP- 302

  Fly   339 PFQPAEVGSVIPVQVQPQQSVKPKVPPPPSAVMAKNTHGYPAAIDIRQVRPSVAPKVANETYATI 403
                                     ||||:                                   
  Rat   303 -------------------------PPPPA----------------------------------- 307

  Fly   404 SPQRKVGSMRVPPPAPPKPTIVPHTNSTISNGSLYAVSPVQYAPVAKPAPPAAPAKPTSRSSAVY 468
               |..|:   |||.|.:                        ||.|.|.||     |.||...| 
  Rat   308 ---RGRGA---PPPPPSR------------------------APTAAPPPP-----PPSRPGVV- 336

  Fly   469 MTPLSAQKTQISSTPVPVSPPPPTAASVGVPPPPPAPPAGVPPAPPPMPVFGAGGA----PPPPP 529
                             |.||||...   .||||||.|:..|..|||.|.....|:    |||||
  Rat   337 -----------------VPPPPPNRM---YPPPPPALPSSAPSGPPPPPPLSMAGSTAPPPPPPP 381

  Fly   530 PPSSGMAGVPPPPPMQKSQPKAVSAASTGGDPRDAFLESIRQGVKLKKVDQKAATISGIKPRPER 594
            ||..|    |||||...|.......||:|.  :.|.|:.||:|.:||||:|.:            
  Rat   382 PPPPG----PPPPPGLPSDGDHQVPASSGN--KAALLDQIREGAQLKKVEQNS------------ 428

  Fly   595 KPVTTD----FLSELKLGITLRRVKN------PADNPYS 623
            :||:..    .|.:::.||.|:.|.:      |...|.|
  Rat   429 RPVSCSGRDALLDQIRQGIQLKSVSDGQESTPPTPAPTS 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WhamyNP_001036699.1 WH2 558..>580 CDD:280384 10/21 (48%)
WaslXP_038964277.1 WH1 28..135 CDD:395450 8/38 (21%)
PBD 199..256 CDD:395634 23/61 (38%)
WH2_N-WASP_r1 404..430 CDD:409217 12/39 (31%)
WH2_hN-WASP_r2_like 431..455 CDD:409218 6/23 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3671
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001481
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.900

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