DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Whamy and was

DIOPT Version :9

Sequence 1:NP_001036699.1 Gene:Whamy / 41198 FlyBaseID:FBgn0037750 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001107675.1 Gene:was / 496673 XenbaseID:XB-GENE-5759991 Length:476 Species:Xenopus tropicalis


Alignment Length:626 Identity:144/626 - (23%)
Similarity:204/626 - (32%) Gaps:270/626 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FDLRGQGTDEMLQLYLRKANLSDDLERLPAIVRRAYVYDIIRSNKEPG-----------YWVVIS 82
            |||:.:......:||       :.|..|||   |.|.:.......:.|           :.||:.
 Frog    80 FDLQEEKAVWEQELY-------EQLRYLPA---RPYFHTFCSDECQTGLNFADEAEAADFQVVVE 134

  Fly    83 CSISSCQLHQPKVSLMLSTVVLNAAVFFSFQPPSMQVSSD----VFAHPPPAVRP-------PPH 136
            ..:...|..|.:...:               ||...||.|    :...|||...|       |..
 Frog   135 EKLKKKQHRQDRRQNL---------------PPPPPVSDDRRTSLPLPPPPGPGPFPNGPSSPQP 184

  Fly   137 YADNVSINASLDGMKSSSSSNSLDRYLGAPPSVALAGPSFATSVLVSSKG----SKYEISGPVNF 197
            .|.:.|:|.....:.:...:::..|.|.||....           .:.||    ||.:|..|..|
 Frog   185 LAPSQSLNMPAVSIPNPDITSARYRALSAPADKG-----------KNKKGKKKFSKADIGAPSGF 238

  Fly   198 QHVSGDVTRDRTRNAFDLN-ADPNDKVLRKYMMERGITEADISDMRRQEVIKKIIHSNFTWMPPK 261
            :||| .|..| ..:.||:| .||:   :|......||::|.:.|....::|       :.::..:
 Frog   239 KHVS-HVGWD-PNSGFDVNQLDPD---IRNLFSRAGISDAQLKDAETSKLI-------YDFIEQQ 291

  Fly   262 SDLQAQPKVQDHARPLLYATISTNNQITPPPSPPPPPIATISRPTEAPNFSNYASLTSRFVDISD 326
            ..::|   |::..|         ..:..|||.||       ||  .||                 
 Frog   292 GGVEA---VKNEMR---------RGETAPPPPPP-------SR--NAP----------------- 318

  Fly   327 MDLPAPTPAAPTPFQPAEVGSVIPVQVQPQQSVKPKVPPPPSAVMAKNTHGYPAAIDIRQVRPSV 391
               |||||:.         |...|            :||||                   ||.|.
 Frog   319 ---PAPTPSR---------GRTGP------------LPPPP-------------------VRGSS 340

  Fly   392 APKVANETYATISPQRKVGSMRVPPPAPPKPTIVPHTNSTISNGSLYAVSPVQYAPVAKPAPPAA 456
            ||                     |||.|.:.|                             ||. 
 Frog   341 AP---------------------PPPPPSRST-----------------------------PPI- 354

  Fly   457 PAKPTSRSSAVYMTPLSAQKTQISSTPVPVSPPPPTAASVGVPPPPPAPPAGVPPAPPPMPVFGA 521
                                            |||||.|.|.|||||.||:  .|||||     .
 Frog   355 --------------------------------PPPTARSGGPPPPPPPPPS--IPAPPP-----T 380

  Fly   522 GGAPPPPPPPSSGMAGVPPPPPMQKSQPKAVSAASTGGDPRDAFLESIRQGVKLKKVDQKAATIS 586
            .|..||||||.||...:|.|.|             :||  |.|.|:.||||.||.|:     |:|
 Frog   381 SGPAPPPPPPVSGTQSIPSPTP-------------SGG--RGALLDQIRQGTKLNKL-----TVS 425

  Fly   587 GIKPRPERKPVTTDFLSELKLGITLRRVK--NPADNPYSEE 625
            . :|.|..:|.:...:..| :.:..:|.|  :.:|:...|:
 Frog   426 A-EPPPSPQPSSEGLVGAL-MHVMQKRSKAIHSSDDDDDED 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WhamyNP_001036699.1 WH2 558..>580 CDD:280384 12/21 (57%)
wasNP_001107675.1 EVH1_WASP-like 39..137 CDD:269916 14/66 (21%)
PBD 231..286 CDD:334253 19/66 (29%)
WH2 405..421 CDD:128542 10/17 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001481
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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