DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Whamy and was

DIOPT Version :10

Sequence 1:NP_001036699.1 Gene:Whamy / 41198 FlyBaseID:FBgn0037750 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001107675.1 Gene:was / 496673 XenbaseID:XB-GENE-5759991 Length:476 Species:Xenopus tropicalis


Alignment Length:626 Identity:144/626 - (23%)
Similarity:204/626 - (32%) Gaps:270/626 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FDLRGQGTDEMLQLYLRKANLSDDLERLPAIVRRAYVYDIIRSNKEPG-----------YWVVIS 82
            |||:.:......:||       :.|..|||   |.|.:.......:.|           :.||:.
 Frog    80 FDLQEEKAVWEQELY-------EQLRYLPA---RPYFHTFCSDECQTGLNFADEAEAADFQVVVE 134

  Fly    83 CSISSCQLHQPKVSLMLSTVVLNAAVFFSFQPPSMQVSSD----VFAHPPPAVRP-------PPH 136
            ..:...|..|.:...:               ||...||.|    :...|||...|       |..
 Frog   135 EKLKKKQHRQDRRQNL---------------PPPPPVSDDRRTSLPLPPPPGPGPFPNGPSSPQP 184

  Fly   137 YADNVSINASLDGMKSSSSSNSLDRYLGAPPSVALAGPSFATSVLVSSKG----SKYEISGPVNF 197
            .|.:.|:|.....:.:...:::..|.|.||....           .:.||    ||.:|..|..|
 Frog   185 LAPSQSLNMPAVSIPNPDITSARYRALSAPADKG-----------KNKKGKKKFSKADIGAPSGF 238

  Fly   198 QHVSGDVTRDRTRNAFDLN-ADPNDKVLRKYMMERGITEADISDMRRQEVIKKIIHSNFTWMPPK 261
            :||| .|..| ..:.||:| .||:   :|......||::|.:.|....::|       :.::..:
 Frog   239 KHVS-HVGWD-PNSGFDVNQLDPD---IRNLFSRAGISDAQLKDAETSKLI-------YDFIEQQ 291

  Fly   262 SDLQAQPKVQDHARPLLYATISTNNQITPPPSPPPPPIATISRPTEAPNFSNYASLTSRFVDISD 326
            ..::|   |::..|         ..:..|||.||       ||  .||                 
 Frog   292 GGVEA---VKNEMR---------RGETAPPPPPP-------SR--NAP----------------- 318

  Fly   327 MDLPAPTPAAPTPFQPAEVGSVIPVQVQPQQSVKPKVPPPPSAVMAKNTHGYPAAIDIRQVRPSV 391
               |||||:.         |...|            :||||                   ||.|.
 Frog   319 ---PAPTPSR---------GRTGP------------LPPPP-------------------VRGSS 340

  Fly   392 APKVANETYATISPQRKVGSMRVPPPAPPKPTIVPHTNSTISNGSLYAVSPVQYAPVAKPAPPAA 456
            ||                     |||.|.:.|                             ||. 
 Frog   341 AP---------------------PPPPPSRST-----------------------------PPI- 354

  Fly   457 PAKPTSRSSAVYMTPLSAQKTQISSTPVPVSPPPPTAASVGVPPPPPAPPAGVPPAPPPMPVFGA 521
                                            |||||.|.|.|||||.||:  .|||||     .
 Frog   355 --------------------------------PPPTARSGGPPPPPPPPPS--IPAPPP-----T 380

  Fly   522 GGAPPPPPPPSSGMAGVPPPPPMQKSQPKAVSAASTGGDPRDAFLESIRQGVKLKKVDQKAATIS 586
            .|..||||||.||...:|.|.|             :||  |.|.|:.||||.||.|:     |:|
 Frog   381 SGPAPPPPPPVSGTQSIPSPTP-------------SGG--RGALLDQIRQGTKLNKL-----TVS 425

  Fly   587 GIKPRPERKPVTTDFLSELKLGITLRRVK--NPADNPYSEE 625
            . :|.|..:|.:...:..| :.:..:|.|  :.:|:...|:
 Frog   426 A-EPPPSPQPSSEGLVGAL-MHVMQKRSKAIHSSDDDDDED 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WhamyNP_001036699.1 WH2 558..>580 CDD:460490 12/21 (57%)
wasNP_001107675.1 EVH1_WASP-like 39..137 CDD:269916 14/66 (21%)
PBD 231..290 CDD:395634 19/70 (27%)
WH2 402..427 CDD:460490 15/45 (33%)

Return to query results.
Submit another query.