DRSC/TRiP Functional Genomics Resources

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Protein Alignment Whamy and WASp

DIOPT Version :9

Sequence 1:NP_001036699.1 Gene:Whamy / 41198 FlyBaseID:FBgn0037750 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001263045.1 Gene:WASp / 43402 FlyBaseID:FBgn0024273 Length:527 Species:Drosophila melanogaster


Alignment Length:554 Identity:132/554 - (23%)
Similarity:186/554 - (33%) Gaps:247/554 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 PPPAV-----RPPPHYADNVSINASLDGMKSSSSSNSLDRYLGAPPSVALAGPSFATSVLVSSKG 186
            |.|.|     ||||....    .:|.||::..::..:......||      .|:.:.:.|.||.|
  Fly   163 PLPQVQREPARPPPMQGG----LSSTDGVQLRNNKINSVTLTPAP------APAQSKNFLSSSFG 217

  Fly   187 ------------SKYEISGPVNFQHVSGDVTRDRTRNAFDLNADPNDKVLRKYMMERGITEADIS 239
                        :|.:||.|.||.|:| .|..| .:..|||..:.||:||.::.::.|::|.::.
  Fly   218 LGNNAKDKKRKVTKADISRPTNFVHLS-HVGWD-AQKGFDLAGNENDEVLNEFFVKAGVSEVELK 280

  Fly   240 DMRRQEVIKKIIHSNFTWMPPKSDLQAQPKVQDHARPLLYATISTNNQITPPPSPPPPPIATISR 304
            |...:..|...|.||        ::.|..|......|            |...:|.|||:     
  Fly   281 DRDTRAFIYDFIQSN--------NVLASVKQYSVESP------------TETAAPMPPPV----- 320

  Fly   305 PTEAPNFSNYASLTSRFVDISDMDLPAPTPAAPTPFQPAEVGSVIPVQVQPQQSVKPKVPP---P 366
            ||..|:..|                                           |...|.:||   |
  Fly   321 PTRHPSNGN-------------------------------------------QRTAPPLPPARQP 342

  Fly   367 PSAVMAKNTHGYPAAIDIRQVRPSVAPKVANETYATISPQRKVGSMRVPPPAPPKPTIVPHTNST 431
            |.||                  |...|                |:.|.||| |.:|         
  Fly   343 PPAV------------------PVTVP----------------GAARAPPP-PNRP--------- 363

  Fly   432 ISNGSLYAVSPVQYAPVAKPAPPAAPAKPTSRSSAVYMTPLSAQKTQISSTPVPVSPPPPTAASV 496
                                 ||.:.|.|                           |||.:|..|
  Fly   364 ---------------------PPISTAPP---------------------------PPPVSAPVV 380

  Fly   497 GVPPPPPAPPAGVPPAPPPMPVFGAGGAPPPPPPPSSGMAGVP----PPPPMQKSQPKAVSAAST 557
            ..|||||.|||.|||             |||||.|   :..:|    ...|.|.::|    ||..
  Fly   381 APPPPPPPPPAAVPP-------------PPPPPMP---VGEIPVITTTHAPTQAARP----AAPA 425

  Fly   558 GGDPRDAFLESIRQGVKLKKVDQKA-ATISG---------------IKPRPERK---------PV 597
            ..|||:|.:::||:|.:|||||..| :|.||               :||..||:         ..
  Fly   426 APDPRNALMDAIRKGTQLKKVDTTALSTGSGDSRSDLMKDIRQGTVLKPAKERELGSQRNSDSGA 490

  Fly   598 TTDFLSELKLGITLRRVKNPADNP-YSEESESQA 630
            .||.|::     .|||......|. :|:|.|:::
  Fly   491 GTDALAD-----ALRRALAARGNAIHSDEDETES 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WhamyNP_001036699.1 WH2 558..>580 CDD:280384 11/21 (52%)
WASpNP_001263045.1 WH1 31..140 CDD:144235
PBD 233..291 CDD:279166 20/59 (34%)
WH2 <433..453 CDD:280384 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3671
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001481
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.900

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