DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Whamy and wasl

DIOPT Version :9

Sequence 1:NP_001036699.1 Gene:Whamy / 41198 FlyBaseID:FBgn0037750 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001001206.1 Gene:wasl / 407864 XenbaseID:XB-GENE-1017182 Length:511 Species:Xenopus tropicalis


Alignment Length:623 Identity:139/623 - (22%)
Similarity:203/623 - (32%) Gaps:249/623 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 TDEMLQLYLRKANLSDDLERLPAIVRRAYVYDIIRSNKEPGYWVVISCSISSCQLHQPKVSLMLS 100
            |..::|::|...| |..:::...:|      .:::.|.:..|::.:.......|||:.:   :..
 Frog    46 TSAVVQVFLSDRN-SMWVKKCCGVV------CLVKDNPQRSYFIRVYDIKEGRQLHEQE---LYY 100

  Fly   101 TVVLNA--AVFFSFQPPSMQV----------------SSDVFA---HPPPAVRPPPHYADNVSIN 144
            ..|.|:  ..|.:|...:.|:                ::|:.:   ..|...|.||   :..|:.
 Frog   101 NFVYNSPRPYFHTFPGDTCQIGLNFASEEEAKRFRKATTDLISRRPRKPDKKREPP---NGPSLP 162

  Fly   145 ASLDGMKSSSSSNSLDRYLGAPPSVALAGPSFATSVLVSSKG-------SKYEISGPVNFQHVSG 202
            .:...:|:...:|   ||.....::.....        ..||       :|.:|..|.||||: |
 Frog   163 MATVDIKNPEITN---RYNAQVNNIPYKND--------KKKGKTKKKKLTKADIGTPSNFQHI-G 215

  Fly   203 DVTRDRTRNAFDL-NADPNDKVLRKYMMERGITEADISDMRRQEVIKKIIHSNFTWMPPKSDLQA 266
            .|..| ....||: |.||.   |:|.....||:||.:.|....:||...|.........|::|: 
 Frog   216 HVGWD-PNTGFDVNNLDPE---LKKLFDLCGISEAQLKDKETSKVIYDFIEKTGGVEAVKNELR- 275

  Fly   267 QPKVQDHARPLLYATISTNNQITPPPSP----PPPPIATISRPTEAPNFSNYASLTSRFVDISDM 327
                               .|..|||.|    ||||                             
 Frog   276 -------------------RQAPPPPPPSRGGPPPP----------------------------- 292

  Fly   328 DLPAPTPAAPTPFQPAEVGSVIPVQVQPQQSVKPKVPPPPSAVMAKNTHGYPAAIDIRQVRPSVA 392
              |.|..:.|.|..|...|.              ..||||                     ||.|
 Frog   293 --PPPHSSGPPPPPPPARGR--------------GAPPPP---------------------PSRA 320

  Fly   393 PKVANETYATISPQRKVGSMRVPPPAPPKPTIVPHTNSTISNGSLYAVSPVQYAPVAKPAPPAAP 457
            |..|                  |||.||                   :.|.|..|   |.||   
 Frog   321 PTTA------------------PPPPPP-------------------IRPGQSGP---PPPP--- 342

  Fly   458 AKPTSRSSAVYMTPLSAQKTQISSTPVPVSPPPPTAASVGVPPPPPAPPAGVPPAPPPMPVFGAG 522
                   :.:|                   ||||...:...|..||.     ||.|||...|||.
 Frog   343 -------NRMY-------------------PPPPPGHTSSAPSSPPP-----PPPPPPSSGFGAA 376

  Fly   523 GAPPPPPPPSSGMAGVPPPPPM--QKSQPKAVSAASTGGDPRDAFLESIRQGVKLKKVDQKAATI 585
            ..|||||||..|     |||..  :.....|||.|:     :.|.|:.||.|..|:|||.:    
 Frog   377 APPPPPPPPPPG-----PPPDFSTENDNHSAVSGAN-----KSALLDQIRGGATLRKVDNR---- 427

  Fly   586 SGIKPRPERKPVTTD----FLSELKLGITLRRVKNPAD 619
                   |.:|.:|.    .|.:::.||.|:.|.:.:|
 Frog   428 -------ESRPTSTSGRDALLDQIRQGIQLKSVPDESD 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WhamyNP_001036699.1 WH2 558..>580 CDD:280384 8/21 (38%)
waslNP_001001206.1 EVH1_WASP-like 44..142 CDD:269916 17/105 (16%)
PBD 204..259 CDD:334253 23/59 (39%)
WH2 409..424 CDD:128542 6/14 (43%)
WH2 436..453 CDD:128542 4/16 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001481
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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